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2RR9
Asym. Unit
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Asym.Unit (1.1 MB)
Biol.Unit 1 (55 KB)
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Models
(20 )
Title
:
THE SOLUTION STRUCTURE OF THE K63-UB2:TUIMS COMPLEX
Authors
:
N. Sekiyama, J. Jee, S. Isogai, K. Akagi, T. Huang, M. Ariyoshi, H. Tochi M. Shirakawa
Date
:
16 Jun 10 (Deposition) - 06 Jul 11 (Release) - 06 Jul 11 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B,C (20 x)
Biol. Unit 1: A,B,C (1x)
Keywords
:
Lys63-Linked Diubiquitin, Ubiquitin-Interacting Motif, Ubiquitin, Rap80, Dna Repair, Nuclear Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Sekiyama, J. Jee, S. Isogai, K. Akagi, T. Huang, M. Ariyoshi, H. Tochio, M. Shirakawa
The Solution Structure Of The K63-Ub2:Tuims Complex
To Be Published
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(3, 5)
Info
All PROSITE Patterns/Profiles
1: UBIQUITIN_2 (-|-|-|-|-|-|-|-|A:1-76,B:1-76)
2: UBIQUITIN_1 (-|-|-|-|-|-|-|-|A:27-52,B:27-52)
3: UIM (C:80-99)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
UBIQUITIN_2
PS50053
Ubiquitin domain profile.
UBC_HUMAN
1-76
77-152
153-228
229-304
305-380
381-456
457-532
533-608
609-684
2
-
-
-
-
-
-
-
-
A:1-76
B:1-76
2
UBIQUITIN_1
PS00299
Ubiquitin domain signature.
UBC_HUMAN
27-52
103-128
179-204
255-280
331-356
407-432
483-508
559-584
635-660
2
-
-
-
-
-
-
-
-
A:27-52
B:27-52
3
UIM
PS50330
Ubiquitin-interacting motif (UIM) domain profile.
UIMC1_HUMAN
80-99
1
C:80-99
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Exons
(1, 2)
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Exon 1.2 (A:1-76 | B:1-76)
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1: Boundary 1.1/1.2
2: Boundary 1.2/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000339647
1
ENSE00001257182
chr12:
125399577-125399133
445
UBC_HUMAN
-
0
0
-
-
1.2
ENST00000339647
2
ENSE00001406973
chr12:
125398320-125396194
2127
UBC_HUMAN
1-686
686
2
A:1-76
B:1-76
76
76
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SCOP Domains
(1, 2)
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1a: SCOP_d2rr9a_ (A:)
1b: SCOP_d2rr9b_ (B:)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-Grasp (ubiquitin-like)
(1032)
Superfamily
:
Ubiquitin-like
(546)
Family
:
Ubiquitin-related
(337)
Protein domain
:
Ubiquitin
(162)
Human (Homo sapiens) [TaxId: 9606]
(121)
1a
d2rr9a_
A:
1b
d2rr9b_
B:
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CATH Domains
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Asymmetric Unit 1
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Asym.Unit (1.1 MB)
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