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2RR2
Asym. Unit
Info
Asym.Unit (191 KB)
Biol.Unit 1 (11 KB)
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Models
(20 )
Title
:
STRUCTURE OF O-FUCOSYLATED EPIDERMAL GROWTH FACTOR-LIKE REPEAT 12 OF MOUSE NOTCH-1 RECEPTOR
Authors
:
K. Hosoguchi, K. Shimizu, N. Fujitani, S. Nishimura
Date
:
26 Feb 10 (Deposition) - 13 Oct 10 (Release) - 03 Nov 10 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Biol. Unit 1: A (1x)
Keywords
:
Notch, Glycopeptide, O-Linked Fucose, Fringe, Egf-Like Domain, Activator, Ank Repeat, Cell Membrane, Developmental Protein, Differentiation, Disulfide Bond, Glycoprotein, Metal-Binding, Notch Signaling Pathway, Nucleus, Phosphoprotein, Receptor, Transcription, Transcription Regulation, Transmembrane
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
K. Hiruma-Shimizu, K. Hosoguchi, Y. Liu, N. Fujitani, T. Ohta, H. Hinou, T. Matsushita, H. Shimizu, T. Feizi, S. Nishimura
Chemical Synthesis, Folding, And Structural Insights Into O-Fucosylated Epidermal Growth Factor-Like Repeat 12 Of Mouse Notch-1 Receptor
J. Am. Chem. Soc. V. 132 14857 2010
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: ALPHA-L-FUCOSE (FUCa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FUC
1
Ligand/Ion
ALPHA-L-FUCOSE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:15 , ILE A:26 , CYS A:27
BINDING SITE FOR RESIDUE FUC A 39
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available in "Model" view)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(5, 4)
Info
All PROSITE Patterns/Profiles
1: EGF_3 (-|-|-|-|-|-|-|-|-|-|-|A:1-37|-|-|-...)
2: EGF_1 (-|-|-|-|-|-|-|-|-|-|-|A:25-36|-|-|...)
3: EGF_2 (-|-|-|-|-|-|-|A:25-36|-|-|-|-|-|-|...)
4: EGF_CA (-|-|-|-|-|A:1-25|-|-|-|-|-|-|-|-|-...)
5: ASX_HYDROXYL (-|-|-|-|-|A:16-27|-|-|-|-|-|-|-|-|...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EGF_3
PS50026
EGF-like domain profile.
NOTC1_MOUSE
20-58
59-99
102-139
140-176
178-216
218-255
257-293
295-333
335-371
372-410
412-450
452-488
490-526
528-564
566-601
603-639
641-676
678-714
716-751
753-789
791-827
829-867
869-905
907-943
945-981
983-1019
1021-1057
1059-1095
1108-1143
1145-1181
1183-1219
1221-1265
1267-1305
1307-1346
1348-1384
1387-1426
1
-
-
-
-
-
-
-
-
-
-
-
A:1-37
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
2
EGF_1
PS00022
EGF-like domain signature 1.
NOTC1_MOUSE
46-57
87-98
127-138
164-175
204-215
243-254
281-292
321-332
359-370
398-409
438-449
476-487
514-525
552-563
589-600
627-638
664-675
739-750
777-788
815-826
855-866
893-904
931-942
969-980
1007-1018
1045-1056
1083-1094
1131-1142
1169-1180
1207-1218
1253-1264
1293-1304
1334-1345
1372-1383
1414-1425
1
-
-
-
-
-
-
-
-
-
-
-
A:25-36
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
3
EGF_2
PS01186
EGF-like domain signature 2.
NOTC1_MOUSE
87-98
127-138
164-175
243-254
321-332
398-409
438-449
476-487
514-525
552-563
589-600
664-675
702-713
739-750
777-788
815-826
855-866
893-904
931-942
969-980
1007-1018
1045-1056
1083-1094
1131-1142
1169-1180
1253-1264
1334-1345
1
-
-
-
-
-
-
-
A:25-36
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
4
EGF_CA
PS01187
Calcium-binding EGF-like domain signature.
NOTC1_MOUSE
178-204
257-281
295-321
335-359
412-438
452-476
490-514
528-552
566-589
603-627
641-664
678-702
716-739
753-777
791-815
869-893
945-969
1021-1045
1145-1169
1183-1207
1221-1253
1
-
-
-
-
-
A:1-25
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
5
ASX_HYDROXYL
PS00010
Aspartic acid and asparagine hydroxylation site.
NOTC1_MOUSE
195-206
272-283
312-323
350-361
429-440
467-478
505-516
543-554
580-591
618-629
655-666
693-704
730-741
768-779
806-817
884-895
960-971
998-1009
1036-1047
1160-1171
1198-1209
1244-1255
1
-
-
-
-
-
A:16-27
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_EGF_CA_2rr2A01 (A:1-38)
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Clan
:
EGF
(60)
Family
:
EGF_CA
(18)
Mus musculus (Mouse)
(3)
1a
EGF_CA-2rr2A01
A:1-38
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Chain A
Asymmetric Unit 1
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Asym.Unit (191 KB)
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