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2RGT
Biol. Unit 1
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Asym.Unit (57 KB)
Biol.Unit 1 (50 KB)
Biol.Unit 2 (27 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF LHX3 LIM DOMAINS 1 AND 2 WITH THE BINDING DOMAIN OF ISL1
Authors
:
M. Bhati, M. Lee, J. M. Guss, J. M. Matthews
Date
:
05 Oct 07 (Deposition) - 12 Aug 08 (Release) - 28 Jun 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (2x)
Biol. Unit 2: B (1x)
Keywords
:
Protein-Protein Complex, Lim Domain, Zn Finger, Activator, Dna- Binding, Homeobox, Metal-Binding, Nucleus, Transcription, Transcription Regulation, Metal Binding Protein
(Keyword Search:
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Reference
:
M. Bhati, C. Lee, A. L. Nancarrow, M. Lee, V. J. Craig, I. Bach, J. M. Guss J. P. Mackay, J. M. Matthews
Implementing The Lim Code: The Structural Basis For Cell Type-Specific Assembly Of Lim-Homeodomain Complexes.
Embo J. V. 27 2018 2008
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
1c: ZINC ION (ZNc)
1d: ZINC ION (ZNd)
1e: ZINC ION (ZNe)
1f: ZINC ION (ZNf)
1g: ZINC ION (ZNg)
1h: ZINC ION (ZNh)
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Sites
(4, 4)
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All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:34 , CYS A:37 , HIS A:55 , CYS A:58
BINDING SITE FOR RESIDUE ZN A 205
2
AC2
SOFTWARE
CYS A:61 , CYS A:64 , CYS A:81 , ASP A:84
BINDING SITE FOR RESIDUE ZN A 206
3
AC3
SOFTWARE
CYS A:93 , CYS A:96 , HIS A:115 , CYS A:118
BINDING SITE FOR RESIDUE ZN A 207
4
AC4
SOFTWARE
CYS A:121 , CYS A:124 , CYS A:144 , ASP A:147
BINDING SITE FOR RESIDUE ZN A 208
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(3, 18)
Info
All PROSITE Patterns/Profiles
1: LIM_DOMAIN_2 (A:32-91,A:92-153)
2: LIM_DOMAIN_1 (A:34-68,A:93-128)
3: HOMEOBOX_2 (A:263-271)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
LIM_DOMAIN_2
PS50023
LIM domain profile.
ISL1_MOUSE
15-77
78-139
4
A:34-90
-
A:92-147
-
LHX3_MOUSE
32-91
92-154
4
A:32-91
-
A:92-153
-
2
LIM_DOMAIN_1
PS00478
LIM zinc-binding domain signature.
ISL1_MOUSE
17-52
79-114
4
A:34-68
-
A:93-128
-
LHX3_MOUSE
34-68
93-128
4
A:34-68
-
A:93-128
-
3
HOMEOBOX_2
PS50071
'Homeobox' domain profile.
LHX3_MOUSE
158-218
2
A:263-271
-
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Exons
(0, 0)
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_LIM_2rgtB01 (B:93-152)
1b: PFAM_LIM_2rgtB02 (B:93-152)
1c: PFAM_LIM_2rgtB03 (B:93-152)
1d: PFAM_LIM_2rgtB04 (B:93-152)
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Clan
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no clan defined [family: LIM]
(23)
Family
:
LIM
(23)
Mus musculus (Mouse)
(3)
1a
LIM-2rgtB01
B:93-152
1b
LIM-2rgtB02
B:93-152
1c
LIM-2rgtB03
B:93-152
1d
LIM-2rgtB04
B:93-152
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Asym.Unit (57 KB)
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