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2RED
Asym. Unit
Info
Asym.Unit (28 KB)
Biol.Unit 1 (23 KB)
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(1)
Title
:
CRYSTAL STRUCTURES OF C2ALPHA-PI3 KINASE PX-DOMAIN DOMAIN INDICATE CONFORMATIONAL CHANGE ASSOCIATED WITH LIGAND BINDING.
Authors
:
G. N. Parkinson, D. Vines, P. C. Driscoll, S. Djordjevic
Date
:
26 Sep 07 (Deposition) - 27 Nov 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Px Domain, Pi3K, Kinase, Transferase, Nuclear Protein, Phosphoinositide, Cytoplasmic Vesicle, Golgi Apparatus, Membrane, Nucleus, Phosphorylation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
G. N. Parkinson, D. Vines, P. C. Driscoll, S. Djordjevic
Crystal Structures Of Pi3K-C2Alpha Px Domain Indicate Conformational Change Associated With Ligand Binding
Bmc Struct. Biol. V. 8 13 2008
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
6
Ligand/Ion
GLYCEROL
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GOL A:302 , GLU A:1455
BINDING SITE FOR RESIDUE GOL A 301
2
AC2
SOFTWARE
HOH A:16 , GOL A:301 , ASN A:1471
BINDING SITE FOR RESIDUE GOL A 302
3
AC3
SOFTWARE
ASP A:1498 , ALA A:1501 , LYS A:1502 , ILE A:1505
BINDING SITE FOR RESIDUE GOL A 303
4
AC4
SOFTWARE
TRP A:1480 , LYS A:1481 , LEU A:1482 , ALA A:1517
BINDING SITE FOR RESIDUE GOL A 304
5
AC5
SOFTWARE
HOH A:9 , HOH A:50 , GLU A:1455 , PRO A:1456 , PHE A:1458 , LEU A:1479 , TRP A:1480 , LEU A:1482 , PRO A:1483 , GLY A:1484
BINDING SITE FOR RESIDUE GOL A 305
6
AC6
SOFTWARE
HOH A:92 , ILE A:1443 , PHE A:1460 , GLU A:1465 , HIS A:1535
BINDING SITE FOR RESIDUE GOL A 306
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PX (A:1422-1532)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PX
PS50195
PX domain profile.
P3C2A_HUMAN
1422-1538
1
A:1422-1532
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Exons
(5, 5)
Info
All Exons
Exon 1.30 (A:1420-1442)
Exon 1.31 (A:1443-1484)
Exon 1.32 (A:1484-1523 (gaps))
Exon 1.33 (A:1524-1532)
Exon 1.34 (A:1533-1536)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.29/1.30
2: Boundary 1.30/1.31
3: Boundary 1.31/1.32
4: Boundary 1.32/1.33
5: Boundary 1.33/1.34
6: Boundary 1.34/1.35
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.4c
ENST00000265970
4c
ENSE00002193107
chr11:
17191288-17190224
1065
P3C2A_HUMAN
1-355
355
0
-
-
1.5
ENST00000265970
5
ENSE00000988320
chr11:
17177176-17177073
104
P3C2A_HUMAN
356-390
35
0
-
-
1.6
ENST00000265970
6
ENSE00001320292
chr11:
17172202-17172045
158
P3C2A_HUMAN
390-443
54
0
-
-
1.7a
ENST00000265970
7a
ENSE00000988322
chr11:
17170334-17170214
121
P3C2A_HUMAN
443-483
41
0
-
-
1.8
ENST00000265970
8
ENSE00000988323
chr11:
17169175-17169064
112
P3C2A_HUMAN
483-520
38
0
-
-
1.9
ENST00000265970
9
ENSE00000988324
chr11:
17167489-17167410
80
P3C2A_HUMAN
521-547
27
0
-
-
1.10
ENST00000265970
10
ENSE00000988325
chr11:
17167278-17167215
64
P3C2A_HUMAN
547-568
22
0
-
-
1.12
ENST00000265970
12
ENSE00001151290
chr11:
17158172-17158029
144
P3C2A_HUMAN
569-616
48
0
-
-
1.13
ENST00000265970
13
ENSE00000988327
chr11:
17156706-17156658
49
P3C2A_HUMAN
617-633
17
0
-
-
1.14
ENST00000265970
14
ENSE00000988328
chr11:
17156576-17156366
211
P3C2A_HUMAN
633-703
71
0
-
-
1.15
ENST00000265970
15
ENSE00000988329
chr11:
17153585-17153463
123
P3C2A_HUMAN
703-744
42
0
-
-
1.16
ENST00000265970
16
ENSE00000988330
chr11:
17151014-17150847
168
P3C2A_HUMAN
744-800
57
0
-
-
1.17
ENST00000265970
17
ENSE00000988331
chr11:
17144360-17144249
112
P3C2A_HUMAN
800-837
38
0
-
-
1.18
ENST00000265970
18
ENSE00000988332
chr11:
17143880-17143735
146
P3C2A_HUMAN
838-886
49
0
-
-
1.19
ENST00000265970
19
ENSE00000988333
chr11:
17141521-17141333
189
P3C2A_HUMAN
886-949
64
0
-
-
1.20
ENST00000265970
20
ENSE00000988334
chr11:
17140860-17140767
94
P3C2A_HUMAN
949-980
32
0
-
-
1.21
ENST00000265970
21
ENSE00000988335
chr11:
17140286-17140192
95
P3C2A_HUMAN
981-1012
32
0
-
-
1.22
ENST00000265970
22
ENSE00000988336
chr11:
17139218-17139038
181
P3C2A_HUMAN
1012-1072
61
0
-
-
1.23
ENST00000265970
23
ENSE00000988337
chr11:
17136012-17135908
105
P3C2A_HUMAN
1073-1107
35
0
-
-
1.24
ENST00000265970
24
ENSE00000988338
chr11:
17134213-17134121
93
P3C2A_HUMAN
1108-1138
31
0
-
-
1.25
ENST00000265970
25
ENSE00000704614
chr11:
17132108-17131979
130
P3C2A_HUMAN
1139-1182
44
0
-
-
1.26
ENST00000265970
26
ENSE00000704573
chr11:
17126852-17126716
137
P3C2A_HUMAN
1182-1227
46
0
-
-
1.27
ENST00000265970
27
ENSE00000704536
chr11:
17124378-17124209
170
P3C2A_HUMAN
1228-1284
57
0
-
-
1.28
ENST00000265970
28
ENSE00000704509
chr11:
17122981-17122825
157
P3C2A_HUMAN
1284-1336
53
0
-
-
1.29
ENST00000265970
29
ENSE00000704464
chr11:
17121516-17121407
110
P3C2A_HUMAN
1337-1373
37
0
-
-
1.30
ENST00000265970
30
ENSE00000704418
chr11:
17118811-17118604
208
P3C2A_HUMAN
1373-1442
70
1
A:1420-1442
23
1.31
ENST00000265970
31
ENSE00000704364
chr11:
17115932-17115808
125
P3C2A_HUMAN
1443-1484
42
1
A:1443-1484
42
1.32
ENST00000265970
32
ENSE00000704323
chr11:
17113823-17113706
118
P3C2A_HUMAN
1484-1523
40
1
A:1484-1523 (gaps)
40
1.33
ENST00000265970
33
ENSE00000704297
chr11:
17113615-17113543
73
P3C2A_HUMAN
1524-1548
25
1
A:1524-1532
9
1.34
ENST00000265970
34
ENSE00000704269
chr11:
17113203-17113094
110
P3C2A_HUMAN
1548-1584
37
1
A:1533-1536
4
1.35
ENST00000265970
35
ENSE00000704246
chr11:
17113006-17112881
126
P3C2A_HUMAN
1585-1626
42
0
-
-
1.36
ENST00000265970
36
ENSE00000886078
chr11:
17111467-17108119
3349
P3C2A_HUMAN
1627-1686
60
0
-
-
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2reda_ (A:)
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)
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Folds
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
PX domain
(23)
Superfamily
:
PX domain
(23)
Family
:
automated matches
(14)
Protein domain
:
automated matches
(14)
Human (Homo sapiens) [TaxId: 9606]
(14)
1a
d2reda_
A:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_PX_2redA01 (A:1422-1532)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: PX]
(17)
Family
:
PX
(17)
Homo sapiens (Human)
(11)
1a
PX-2redA01
A:1422-1532
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