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2R6S
Biol. Unit 1
Info
Asym.Unit (67 KB)
Biol.Unit 1 (470 KB)
Biol.Unit 2 (236 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF GAB PROTEIN
Authors
:
B. Lohkamp, D. Dobritzsch
Date
:
06 Sep 07 (Deposition) - 03 Jun 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (8x)
Biol. Unit 2: A (4x)
Keywords
:
Jelly-Roll Motif, Unknown Function
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Lohkamp, D. Dobritzsch
A Mixture Of Fortunes: The Curious Determination Of The Structure Of Escherichia Coli Bl21 Gab Protein.
Acta Crystallogr. , Sect. D V. 64 407 2008
[
close entry info
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Hetero Components
(4, 208)
Info
All Hetero Components
1a: BICINE (BCNa)
2a: FE (II) ION (FE2a)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
3e: GLYCEROL (GOLe)
3f: GLYCEROL (GOLf)
3g: GLYCEROL (GOLg)
3h: GLYCEROL (GOLh)
3i: GLYCEROL (GOLi)
3j: GLYCEROL (GOLj)
3k: GLYCEROL (GOLk)
3l: GLYCEROL (GOLl)
3m: GLYCEROL (GOLm)
3n: GLYCEROL (GOLn)
3o: GLYCEROL (GOLo)
3p: GLYCEROL (GOLp)
3q: GLYCEROL (GOLq)
3r: GLYCEROL (GOLr)
3s: GLYCEROL (GOLs)
3t: GLYCEROL (GOLt)
3u: GLYCEROL (GOLu)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BCN
8
Ligand/Ion
BICINE
2
FE2
8
Ligand/Ion
FE (II) ION
3
GOL
168
Ligand/Ion
GLYCEROL
4
SO4
24
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(26, 26)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:160 , ASP A:162 , HIS A:292
BINDING SITE FOR RESIDUE FE2 A 501
02
AC2
SOFTWARE
ASP A:162 , GLY A:163 , TYR A:165 , ARG A:311 , HOH A:542 , HOH A:599 , HOH A:615
BINDING SITE FOR RESIDUE SO4 A 502
03
AC3
SOFTWARE
LYS A:141 , ARG A:304 , HOH A:725
BINDING SITE FOR RESIDUE SO4 A 503
04
AC4
SOFTWARE
ARG A:64 , ARG A:124 , PHE A:127 , GLN A:133 , TYR A:134 , HOH A:568 , HOH A:569 , HOH A:722 , HOH A:733
BINDING SITE FOR RESIDUE SO4 A 504
05
AC5
SOFTWARE
MET A:157 , HIS A:160 , ASP A:162 , MET A:175 , ILE A:244 , PHE A:247 , HIS A:292 , ARG A:311 , HOH A:602
BINDING SITE FOR RESIDUE BCN A 505
06
AC6
SOFTWARE
LYS A:69 , PHE A:253 , TYR A:321 , HOH A:566
BINDING SITE FOR RESIDUE GOL A 506
07
AC7
SOFTWARE
LEU A:88 , ARG A:90 , GLN A:236 , ARG A:238 , HOH A:604
BINDING SITE FOR RESIDUE GOL A 507
08
AC8
SOFTWARE
ASN A:126 , PHE A:127 , GLY A:163 , TYR A:165 , THR A:170 , ARG A:311 , HOH A:615
BINDING SITE FOR RESIDUE GOL A 508
09
AC9
SOFTWARE
GLU A:180 , PRO A:278 , HOH A:536 , HOH A:584 , HOH A:609 , HOH A:665
BINDING SITE FOR RESIDUE GOL A 509
10
BC1
SOFTWARE
TYR A:313 , HIS A:324 , HOH A:703
BINDING SITE FOR RESIDUE GOL A 510
11
BC2
SOFTWARE
TYR A:202 , ALA A:265 , HOH A:692
BINDING SITE FOR RESIDUE GOL A 511
12
BC3
SOFTWARE
SER A:26 , ALA A:27 , GLN A:28 , SER A:29 , PRO A:30 , GLN A:181 , ASN A:182
BINDING SITE FOR RESIDUE GOL A 512
13
BC4
SOFTWARE
PHE A:138 , MET A:157 , ARG A:309 , HOH A:592 , HOH A:712
BINDING SITE FOR RESIDUE GOL A 513
14
BC5
SOFTWARE
PRO A:25 , SER A:26 , ALA A:27 , ASP A:103 , ASP A:104 , ASP A:179 , GLU A:180 , GLN A:181 , HOH A:584 , HOH A:735
BINDING SITE FOR RESIDUE GOL A 514
15
BC6
SOFTWARE
GLU A:58 , TYR A:135 , ARG A:137
BINDING SITE FOR RESIDUE GOL A 515
16
BC7
SOFTWARE
ASP A:195 , HIS A:300 , HOH A:550 , HOH A:652 , HOH A:724 , HOH A:739
BINDING SITE FOR RESIDUE GOL A 516
17
BC8
SOFTWARE
ASP A:295 , ARG A:296 , THR A:298 , HOH A:694 , HOH A:721
BINDING SITE FOR RESIDUE GOL A 517
18
BC9
SOFTWARE
GLN A:235 , GLN A:325 , HOH A:727
BINDING SITE FOR RESIDUE GOL A 518
19
CC1
SOFTWARE
PRO A:206 , ARG A:210 , GLN A:235 , HOH A:734
BINDING SITE FOR RESIDUE GOL A 519
20
CC2
SOFTWARE
MET A:130 , ARG A:137 , PHE A:138
BINDING SITE FOR RESIDUE GOL A 520
21
CC3
SOFTWARE
HIS A:201 , ARG A:204 , GLN A:236 , HOH A:686
BINDING SITE FOR RESIDUE GOL A 521
22
CC4
SOFTWARE
GLY A:293 , ARG A:294 , LEU A:307 , HOH A:602 , HOH A:618
BINDING SITE FOR RESIDUE GOL A 522
23
CC5
SOFTWARE
LYS A:281 , HOH A:621 , HOH A:677
BINDING SITE FOR RESIDUE GOL A 523
24
CC6
SOFTWARE
ILE A:169 , ASP A:232 , ARG A:242 , HOH A:607 , HOH A:633
BINDING SITE FOR RESIDUE GOL A 524
25
CC7
SOFTWARE
PRO A:81 , LEU A:84 , TYR A:316 , ALA A:317 , TYR A:321 , HOH A:574
BINDING SITE FOR RESIDUE GOL A 525
26
CC8
SOFTWARE
ARG A:204 , GLN A:236 , GLY A:237 , ARG A:238 , HOH A:713
BINDING SITE FOR RESIDUE GOL A 526
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
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Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2r6sa_ (A:)
View:
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Classes
(
)
(
)
Folds
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Superfamilies
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Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Double-stranded beta-helix
(580)
Superfamily
:
Clavaminate synthase-like
(197)
Family
:
Gab protein (hypothetical protein YgaT)
(2)
Protein domain
:
automated matches
(1)
Escherichia coli [TaxId: 562]
(1)
1a
d2r6sa_
A:
[
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]
CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2r6sA00 (A:15-325)
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Topologies
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
4-Layer Sandwich
(459)
Topology
:
Double-stranded beta-helix
(19)
Homologous Superfamily
:
Clavaminate synthase-like
(19)
Escherichia coli. Strain: b-strain
(1)
1a
2r6sA00
A:15-325
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
Asymmetric Unit 2
Asymmetric Unit 3
Asymmetric Unit 4
Asymmetric Unit 5
Asymmetric Unit 6
Asymmetric Unit 7
Asymmetric Unit 8
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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show SS bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (67 KB)
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