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2R4V
Asym. Unit
Info
Asym.Unit (45 KB)
Biol.Unit 1 (41 KB)
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(1)
Title
:
STRUCTURE OF HUMAN CLIC2, CRYSTAL FORM A
Authors
:
G. Hansen, B. A. Cromer, M. A. Gorman, M. W. Parker
Date
:
02 Sep 07 (Deposition) - 13 Nov 07 (Release) - 21 Dec 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Chloride Intracellular Channels, Clic2, Pore-Forming Protein, Ryanodine Receptor, Chloride Channel, Ion Transport, Ionic Channel, Transport, Voltage-Gated Channel, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. A. Cromer, M. A. Gorman, G. Hansen, J. J. Adams, M. Coggan, D. R. Littler, L. J. Brown, M. Mazzanti, S. N. Breit, P. M. G. Curmi, A. F. Dulhunty, P. G. Board, M. W. Parker
Structure Of The Janus Protein Human Clic2
J. Mol. Biol. V. 374 719 2007
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: GLUTATHIONE (GSHa)
1b: GLUTATHIONE (GSHb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
GSH
2
Ligand/Ion
GLUTATHIONE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:25 , SER A:26 , ILE A:27 , PHE A:37 , TRP A:41 , THR A:51 , HIS A:227 , HOH A:330 , HOH A:347
BINDING SITE FOR RESIDUE GSH A 248
2
AC2
SOFTWARE
PRO A:97 , ARG A:98 , TYR A:99 , PRO A:100 , HIS A:101 , ALA A:131 , ASN A:134 , PHE A:135 , GLN A:178 , HOH A:328 , HOH A:372
BINDING SITE FOR RESIDUE GSH A 249
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_068898 (H101Q, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_068898
H
101
Q
CLIC2_HUMAN
Disease (MRXS32)
---
A
H
101
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: GST_CTER (A:76-239)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GST_CTER
PS50405
Soluble glutathione S-transferase C-terminal domain profile.
CLIC2_HUMAN
76-239
1
A:76-239
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Exons
(6, 6)
Info
All Exons
Exon 1.1c (A:10-19)
Exon 1.3 (A:20-55)
Exon 1.4 (A:66-98)
Exon 1.5 (A:98-134)
Exon 1.6c (A:134-194)
Exon 1.8c (A:195-245)
View:
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All Exon Boundaries
1: Boundary -/1.1c
2: Boundary 1.1c/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/1.6c
6: Boundary 1.6c/1.8c
7: Boundary 1.8c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000369449
1c
ENSE00001890277
X:154563955-154563680
276
CLIC2_HUMAN
1-19
19
1
A:10-19
10
1.3
ENST00000369449
3
ENSE00001620246
X:154528458-154528349
110
CLIC2_HUMAN
20-56
37
1
A:20-55
36
1.4
ENST00000369449
4
ENSE00001096470
X:154528223-154528098
126
CLIC2_HUMAN
56-98
43
1
A:66-98
33
1.5
ENST00000369449
5
ENSE00001023655
X:154509357-154509251
107
CLIC2_HUMAN
98-134
37
1
A:98-134
37
1.6c
ENST00000369449
6c
ENSE00001096460
X:154508619-154508438
182
CLIC2_HUMAN
134-194
61
1
A:134-194
61
1.8c
ENST00000369449
8c
ENSE00001847718
X:154507353-154505500
1854
CLIC2_HUMAN
195-247
53
1
A:195-245
51
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d2r4va2 (A:98-245)
2a: SCOP_d2r4va1 (A:10-97)
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Protein Domains
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
automated matches
(86)
Protein domain
:
automated matches
(86)
Human (Homo sapiens) [TaxId: 9606]
(11)
1a
d2r4va2
A:98-245
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
automated matches
(347)
Protein domain
:
automated matches
(347)
Human (Homo sapiens) [TaxId: 9606]
(87)
2a
d2r4va1
A:10-97
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CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_GST_C_2_2r4vA01 (A:75-218)
2a: PFAM_GST_N_3_2r4vA02 (A:26-98)
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Organisms
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Clan
:
GST_C
(118)
Family
:
GST_C_2
(16)
Homo sapiens (Human)
(11)
1a
GST_C_2-2r4vA01
A:75-218
Clan
:
Thioredoxin
(367)
Family
:
GST_N_3
(20)
Homo sapiens (Human)
(5)
2a
GST_N_3-2r4vA02
A:26-98
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Chain A
Asymmetric Unit 1
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