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2R4H
Asym. Unit
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Asym.Unit (53 KB)
Biol.Unit 1 (17 KB)
Biol.Unit 2 (16 KB)
Biol.Unit 3 (18 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A C1190S MUTANT OF THE 6TH PDZ DOMAIN OF HUMAN MEMBRANE ASSOCIATED GUANYLATE KINASE
Authors
:
E. Ugochukwu, E. S. Pilka, V. Hozjan, K. L. Kavanagh, C. Cooper, A. C. W. P J. M. Elkins, D. A. Doyle, F. Von Delft, M. Sundstrom, C. H. Arrowsmith J. Weigelt, A. M. Edwards, U. Oppermann, Structural Genomics Conso (Sgc)
Date
:
31 Aug 07 (Deposition) - 16 Oct 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Transferase, Pdz, Membrane Associated Guanylate Kinase, Structural Genomics, Structural Genomics Consortium, Sgc, Atp-Binding, Cell Junction, Nucleotide-Binding, Phosphorylation, Tight Junction
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
E. Ugochukwu, E. S. Pilka, V. Hozjan, K. L. Kavanagh, C. Cooper, A. C. W. Pike, J. M. Elkins, D. A. Doyle, F. Von Delft, M. Sundstrom, C. H. Arrowsmith, J. Weigelt, A. M. Edwards, U. Oppermann
Crystal Structure Of A C1190S Mutant Of The 6Th Pdz Domain Of Human Membrane Associated Guanylate Kinase.
To Be Published
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Hetero Components
(1, 5)
Info
All Hetero Components
1a: HISTIDINE (HISa)
1b: HISTIDINE (HISb)
1c: HISTIDINE (HISc)
1d: HISTIDINE (HISd)
1e: HISTIDINE (HISe)
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No.
Name
Count
Type
Full Name
1
HIS
5
Mod. Amino Acid
HISTIDINE
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:47 , ILE A:48 , HIS A:92 , HOH A:116 , HIS C:93
BINDING SITE FOR RESIDUE HIS A 91
2
AC2
SOFTWARE
ARG A:47 , HIS A:91 , HIS C:93
BINDING SITE FOR RESIDUE HIS A 92
3
AC3
SOFTWARE
ASN C:26 , MET C:27 , ASP C:28 , HIS C:92
BINDING SITE FOR RESIDUE HIS C 91
4
AC4
SOFTWARE
GLU C:51 , HIS C:91 , HIS C:93
BINDING SITE FOR RESIDUE HIS C 92
5
AC5
SOFTWARE
HIS A:91 , HIS A:92 , TYR C:30 , HIS C:92 , HOH C:107 , HOH C:124 , HOH C:127
BINDING SITE FOR RESIDUE HIS C 93
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SAPs(SNPs)/Variants
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: PDZ (-|-|-|-|-|A:5-86,B:5-86,C:5-86)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
MAGI1_HUMAN
17-105
472-541
643-721
841-923
998-1094
1152-1234
3
-
-
-
-
-
A:5-86
B:5-86
C:5-86
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Exons
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d2r4ha_ (A:)
1b: SCOP_d2r4hb_ (B:)
1c: SCOP_d2r4hc_ (C:)
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Class
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All beta proteins
(24004)
Fold
:
PDZ domain-like
(299)
Superfamily
:
PDZ domain-like
(299)
Family
:
automated matches
(94)
Protein domain
:
automated matches
(94)
Human (Homo sapiens) [TaxId: 9606]
(71)
1a
d2r4ha_
A:
1b
d2r4hb_
B:
1c
d2r4hc_
C:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_2r4hC01 (C:0-87)
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Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
Pdz3 Domain
(191)
Homologous Superfamily
:
[code=2.30.42.10, no name defined]
(191)
Human (Homo sapiens)
(120)
1a
2r4hC01
C:0-87
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_PDZ_2r4hC01 (C:5-84)
1b: PFAM_PDZ_2r4hC02 (C:5-84)
1c: PFAM_PDZ_2r4hC03 (C:5-84)
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Clan
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PDZ-like
(184)
Family
:
PDZ
(172)
Homo sapiens (Human)
(96)
1a
PDZ-2r4hC01
C:5-84
1b
PDZ-2r4hC02
C:5-84
1c
PDZ-2r4hC03
C:5-84
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