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2R1D
Biol. Unit 8
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Asym.Unit (256 KB)
Biol.Unit 1 (32 KB)
Biol.Unit 10 (5 KB)
Biol.Unit 2 (32 KB)
Biol.Unit 3 (32 KB)
Biol.Unit 4 (32 KB)
Biol.Unit 5 (32 KB)
Biol.Unit 6 (31 KB)
Biol.Unit 7 (32 KB)
Biol.Unit 8 (31 KB)
Biol.Unit 9 (27 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RAT NEUREXIN 1BETA IN THE CA2+ CONTAINING FORM
Authors
:
G. Rudenko
Date
:
22 Aug 07 (Deposition) - 01 Apr 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,W
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Biol. Unit 7: G (1x)
Biol. Unit 8: H (1x)
Biol. Unit 9: I (1x)
Biol. Unit 10: W (1x)
Keywords
:
Beta-Sandwich, Cell Adhesion, Splicing
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. C. Shen, D. A. Kuczynska, I. J. Wu, B. H. Murray, L. R. Sheckler, G. Rudenko
Regulation Of Neurexin 1Beta Tertiary Structure And Ligand Binding Through Alternative Splicing
Structure V. 16 422 2008
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Hetero Components
(0, 0)
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1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
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PROSITE Patterns/Profiles
(1, 1)
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1: LAM_G_DOMAIN (H:41-209)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
LAM_G_DOMAIN
PS50025
Laminin G domain profile.
NRX1B_RAT
87-285
1
-
-
-
-
-
-
-
H:41-209
-
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Exons
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SCOP Domains
(1, 9)
Info
All SCOP Domains
1a: SCOP_d2r1da1 (A:36-212)
1b: SCOP_d2r1di1 (I:39-211)
1c: SCOP_d2r1db1 (B:36-212)
1d: SCOP_d2r1dc1 (C:36-212)
1e: SCOP_d2r1dd1 (D:36-212)
1f: SCOP_d2r1de1 (E:36-212)
1g: SCOP_d2r1df1 (F:36-212)
1h: SCOP_d2r1dg1 (G:36-212)
1i: SCOP_d2r1dh1 (H:36-211)
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Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Laminin G-like module
(37)
Protein domain
:
Ligand-binding domain of neurexin 1beta
(7)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(5)
1a
d2r1da1
A:36-212
1b
d2r1di1
I:39-211
1c
d2r1db1
B:36-212
1d
d2r1dc1
C:36-212
1e
d2r1dd1
D:36-212
1f
d2r1de1
E:36-212
1g
d2r1df1
F:36-212
1h
d2r1dg1
G:36-212
1i
d2r1dh1
H:36-211
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CATH Domains
(1, 9)
Info
all CATH domains
1a: CATH_2r1dC00 (C:34-216)
1b: CATH_2r1dA00 (A:35-216)
1c: CATH_2r1dE00 (E:35-216)
1d: CATH_2r1dG00 (G:35-216)
1e: CATH_2r1dB00 (B:35-214)
1f: CATH_2r1dD00 (D:35-213)
1g: CATH_2r1dF00 (F:35-212)
1h: CATH_2r1dH00 (H:36-211)
1i: CATH_2r1dI00 (I:39-211)
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Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.200, no name defined]
(421)
Norway rat (Rattus norvegicus)
(5)
1a
2r1dC00
C:34-216
1b
2r1dA00
A:35-216
1c
2r1dE00
E:35-216
1d
2r1dG00
G:35-216
1e
2r1dB00
B:35-214
1f
2r1dD00
D:35-213
1g
2r1dF00
F:35-212
1h
2r1dH00
H:36-211
1i
2r1dI00
I:39-211
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Pfam Domains
(1, 9)
Info
all PFAM domains
1a: PFAM_Laminin_G_2_2r1dI01 (I:71-190)
1b: PFAM_Laminin_G_2_2r1dI02 (I:71-190)
1c: PFAM_Laminin_G_2_2r1dI03 (I:71-190)
1d: PFAM_Laminin_G_2_2r1dI04 (I:71-190)
1e: PFAM_Laminin_G_2_2r1dI05 (I:71-190)
1f: PFAM_Laminin_G_2_2r1dI06 (I:71-190)
1g: PFAM_Laminin_G_2_2r1dI07 (I:71-190)
1h: PFAM_Laminin_G_2_2r1dI08 (I:71-190)
1i: PFAM_Laminin_G_2_2r1dI09 (I:71-190)
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Clan
:
Concanavalin
(293)
Family
:
Laminin_G_2
(14)
Rattus norvegicus (Rat)
(4)
1a
Laminin_G_2-2r1dI01
I:71-190
1b
Laminin_G_2-2r1dI02
I:71-190
1c
Laminin_G_2-2r1dI03
I:71-190
1d
Laminin_G_2-2r1dI04
I:71-190
1e
Laminin_G_2-2r1dI05
I:71-190
1f
Laminin_G_2-2r1dI06
I:71-190
1g
Laminin_G_2-2r1dI07
I:71-190
1h
Laminin_G_2-2r1dI08
I:71-190
1i
Laminin_G_2-2r1dI09
I:71-190
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Show PDB file:
Asym.Unit (256 KB)
Header - Asym.Unit
Biol.Unit 1 (32 KB)
Header - Biol.Unit 1
Biol.Unit 10 (5 KB)
Header - Biol.Unit 10
Biol.Unit 2 (32 KB)
Header - Biol.Unit 2
Biol.Unit 3 (32 KB)
Header - Biol.Unit 3
Biol.Unit 4 (32 KB)
Header - Biol.Unit 4
Biol.Unit 5 (32 KB)
Header - Biol.Unit 5
Biol.Unit 6 (31 KB)
Header - Biol.Unit 6
Biol.Unit 7 (32 KB)
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Biol.Unit 8 (31 KB)
Header - Biol.Unit 8
Biol.Unit 9 (27 KB)
Header - Biol.Unit 9
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