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2QUB
Biol. Unit 6
Info
Asym.Unit (597 KB)
Biol.Unit 1 (106 KB)
Biol.Unit 2 (107 KB)
Biol.Unit 3 (106 KB)
Biol.Unit 4 (107 KB)
Biol.Unit 5 (105 KB)
Biol.Unit 6 (106 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF EXTRACELLULAR LIPASE LIPA FROM SERRATIA MARCESCENS
Authors
:
R. Meier, U. Baumann
Date
:
04 Aug 07 (Deposition) - 28 Aug 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,C,E,G,I,K
Biol. Unit 1: A (1x)
Biol. Unit 2: C (1x)
Biol. Unit 3: E (1x)
Biol. Unit 4: G (1x)
Biol. Unit 5: I (1x)
Biol. Unit 6: K (1x)
Keywords
:
Beta Roll, Alpha/Beta Hydrolase, Helical Hairpin, Hydrolase
(Keyword Search:
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Reference
:
R. Meier, T. Drepper, V. Svensson, K. E. Jaeger, U. Baumann
A Calcium-Gated Lid And A Large Beta-Roll Sandwich Are Revealed By The Crystal Structure Of Extracellular Lipase From Serratia Marcescens.
J. Biol. Chem. V. 282 31477 2007
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1aa: CALCIUM ION (CAaa)
1ab: CALCIUM ION (CAab)
1ac: CALCIUM ION (CAac)
1ad: CALCIUM ION (CAad)
1ae: CALCIUM ION (CAae)
1af: CALCIUM ION (CAaf)
1ag: CALCIUM ION (CAag)
1ah: CALCIUM ION (CAah)
1ai: CALCIUM ION (CAai)
1aj: CALCIUM ION (CAaj)
1ak: CALCIUM ION (CAak)
1al: CALCIUM ION (CAal)
1am: CALCIUM ION (CAam)
1an: CALCIUM ION (CAan)
1ao: CALCIUM ION (CAao)
1ap: CALCIUM ION (CAap)
1aq: CALCIUM ION (CAaq)
1ar: CALCIUM ION (CAar)
1as: CALCIUM ION (CAas)
1at: CALCIUM ION (CAat)
1au: CALCIUM ION (CAau)
1av: CALCIUM ION (CAav)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
1j: CALCIUM ION (CAj)
1k: CALCIUM ION (CAk)
1l: CALCIUM ION (CAl)
1m: CALCIUM ION (CAm)
1n: CALCIUM ION (CAn)
1o: CALCIUM ION (CAo)
1p: CALCIUM ION (CAp)
1q: CALCIUM ION (CAq)
1r: CALCIUM ION (CAr)
1s: CALCIUM ION (CAs)
1t: CALCIUM ION (CAt)
1u: CALCIUM ION (CAu)
1v: CALCIUM ION (CAv)
1w: CALCIUM ION (CAw)
1x: CALCIUM ION (CAx)
1y: CALCIUM ION (CAy)
1z: CALCIUM ION (CAz)
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Sites
(8, 8)
Info
All Sites
1: EC5 (SOFTWARE)
2: EC6 (SOFTWARE)
3: EC7 (SOFTWARE)
4: EC8 (SOFTWARE)
5: EC9 (SOFTWARE)
6: FC1 (SOFTWARE)
7: FC2 (SOFTWARE)
8: FC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
EC5
SOFTWARE
GLY K:491 , GLY K:493 , ASP K:495 , GLY K:508 , ALA K:510 , ASP K:513
BINDING SITE FOR RESIDUE CA K 614
2
EC6
SOFTWARE
GLY K:528 , SER K:529 , GLY K:530 , ASP K:532 , PHE K:549 , ASP K:552 , HOH K:781
BINDING SITE FOR RESIDUE CA K 615
3
EC7
SOFTWARE
ASN K:509 , ALA K:510 , GLY K:511 , ASP K:513 , GLY K:527 , SER K:529 , ASP K:532
BINDING SITE FOR RESIDUE CA K 616
4
EC8
SOFTWARE
GLY K:384 , GLY K:386 , ASP K:388 , ASP K:401 , GLY K:403 , ASN K:406
BINDING SITE FOR RESIDUE CA K 617
5
EC9
SOFTWARE
ARG K:393 , GLY K:395 , ASP K:397 , GLY K:410 , LYS K:412 , ASN K:415
BINDING SITE FOR RESIDUE CA K 618
6
FC1
SOFTWARE
SER K:375 , GLY K:377 , ASP K:379 , GLY K:392 , ASP K:394 , ASP K:397
BINDING SITE FOR RESIDUE CA K 619
7
FC2
SOFTWARE
GLU K:254 , ASP K:276 , ASN K:284 , ASN K:285 , HOH K:637 , HOH K:662
BINDING SITE FOR RESIDUE CA K 620
8
FC3
SOFTWARE
THR K:118 , GLN K:120 , SER K:144 , ASP K:153 , ASP K:157 , HOH K:641
BINDING SITE FOR RESIDUE CA K 621
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(2, 36)
Info
all PFAM domains
1a: PFAM_Lipase_3_2qubK01 (K:137-263)
1b: PFAM_Lipase_3_2qubK02 (K:137-263)
1c: PFAM_Lipase_3_2qubK03 (K:137-263)
1d: PFAM_Lipase_3_2qubK04 (K:137-263)
1e: PFAM_Lipase_3_2qubK05 (K:137-263)
1f: PFAM_Lipase_3_2qubK06 (K:137-263)
2a: PFAM_HemolysinCabind_2qubK07 (K:546-563)
2b: PFAM_HemolysinCabind_2qubK08 (K:546-563)
2c: PFAM_HemolysinCabind_2qubK09 (K:546-563)
2d: PFAM_HemolysinCabind_2qubK10 (K:546-563)
2e: PFAM_HemolysinCabind_2qubK11 (K:546-563)
2f: PFAM_HemolysinCabind_2qubK12 (K:546-563)
2g: PFAM_HemolysinCabind_2qubK13 (K:546-563)
2h: PFAM_HemolysinCabind_2qubK14 (K:546-563)
2i: PFAM_HemolysinCabind_2qubK15 (K:546-563)
2j: PFAM_HemolysinCabind_2qubK16 (K:546-563)
2k: PFAM_HemolysinCabind_2qubK17 (K:546-563)
2l: PFAM_HemolysinCabind_2qubK18 (K:546-563)
2m: PFAM_HemolysinCabind_2qubK19 (K:546-563)
2n: PFAM_HemolysinCabind_2qubK20 (K:546-563)
2o: PFAM_HemolysinCabind_2qubK21 (K:546-563)
2p: PFAM_HemolysinCabind_2qubK22 (K:546-563)
2q: PFAM_HemolysinCabind_2qubK23 (K:546-563)
2r: PFAM_HemolysinCabind_2qubK24 (K:546-563)
2s: PFAM_HemolysinCabind_2qubK25 (K:546-563)
2t: PFAM_HemolysinCabind_2qubK26 (K:546-563)
2u: PFAM_HemolysinCabind_2qubK27 (K:546-563)
2v: PFAM_HemolysinCabind_2qubK28 (K:546-563)
2w: PFAM_HemolysinCabind_2qubK29 (K:546-563)
2x: PFAM_HemolysinCabind_2qubK30 (K:546-563)
2y: PFAM_HemolysinCabind_2qubK31 (K:546-563)
2z: PFAM_HemolysinCabind_2qubK32 (K:546-563)
2aa: PFAM_HemolysinCabind_2qubK33 (K:546-563)
2ab: PFAM_HemolysinCabind_2qubK34 (K:546-563)
2ac: PFAM_HemolysinCabind_2qubK35 (K:546-563)
2ad: PFAM_HemolysinCabind_2qubK36 (K:546-563)
View:
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Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
AB_hydrolase
(347)
Family
:
Lipase_3
(11)
Serratia marcescens
(2)
1a
Lipase_3-2qubK01
K:137-263
1b
Lipase_3-2qubK02
K:137-263
1c
Lipase_3-2qubK03
K:137-263
1d
Lipase_3-2qubK04
K:137-263
1e
Lipase_3-2qubK05
K:137-263
1f
Lipase_3-2qubK06
K:137-263
Clan
:
no clan defined [family: HemolysinCabind]
(16)
Family
:
HemolysinCabind
(16)
Serratia marcescens
(4)
2a
HemolysinCabind-2qubK07
K:546-563
2b
HemolysinCabind-2qubK08
K:546-563
2c
HemolysinCabind-2qubK09
K:546-563
2d
HemolysinCabind-2qubK10
K:546-563
2e
HemolysinCabind-2qubK11
K:546-563
2f
HemolysinCabind-2qubK12
K:546-563
2g
HemolysinCabind-2qubK13
K:546-563
2h
HemolysinCabind-2qubK14
K:546-563
2i
HemolysinCabind-2qubK15
K:546-563
2j
HemolysinCabind-2qubK16
K:546-563
2k
HemolysinCabind-2qubK17
K:546-563
2l
HemolysinCabind-2qubK18
K:546-563
2m
HemolysinCabind-2qubK19
K:546-563
2n
HemolysinCabind-2qubK20
K:546-563
2o
HemolysinCabind-2qubK21
K:546-563
2p
HemolysinCabind-2qubK22
K:546-563
2q
HemolysinCabind-2qubK23
K:546-563
2r
HemolysinCabind-2qubK24
K:546-563
2s
HemolysinCabind-2qubK25
K:546-563
2t
HemolysinCabind-2qubK26
K:546-563
2u
HemolysinCabind-2qubK27
K:546-563
2v
HemolysinCabind-2qubK28
K:546-563
2w
HemolysinCabind-2qubK29
K:546-563
2x
HemolysinCabind-2qubK30
K:546-563
2y
HemolysinCabind-2qubK31
K:546-563
2z
HemolysinCabind-2qubK32
K:546-563
2aa
HemolysinCabind-2qubK33
K:546-563
2ab
HemolysinCabind-2qubK34
K:546-563
2ac
HemolysinCabind-2qubK35
K:546-563
2ad
HemolysinCabind-2qubK36
K:546-563
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