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2QRE
Biol. Unit 1
Info
Asym.Unit (172 KB)
Biol.Unit 1 (83 KB)
Biol.Unit 2 (84 KB)
Biol.Unit 3 (163 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ADENYLATE SENSOR FROM AMP-ACTIVATED PROTEIN KINASE IN COMPLEX WITH 5-AMINOIMIDAZOLE-4-CARBOXAMIDE 1-BETA-D-RIBOFURANOTIDE (ZMP)
Authors
:
X. Jin, R. Townley, L. Shapiro
Date
:
28 Jul 07 (Deposition) - 23 Oct 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.01
Chains
:
Asym. Unit : A,B,C,D,E,G
Biol. Unit 1: A,B,G (1x)
Biol. Unit 2: C,D,E (1x)
Biol. Unit 3: A,B,C,D,E,G (1x)
Keywords
:
Ampk, 5-Aminoimidazole-4-Carboxamide 1-Beta-D-Ribofuranotide, Zmp, Aicar Phosphate, Atp-Binding, Kinase, Nucleotide-Binding, Serine/Threonine-Protein Kinase, Transferase, Cbs Domain
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Jin, R. Townley, L. Shapiro
Structural Insight Into Ampk Regulation: Adp Comes Into Play.
Structure V. 15 1285 2007
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBON... (AMZa)
1b: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBON... (AMZb)
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No.
Name
Count
Type
Full Name
1
AMZ
1
Ligand/Ion
AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG G:139 , ARG G:141 , THR G:191 , LEU G:195 , ALA G:196 , LYS G:214 , ILE G:216 , SER G:217 , ILE G:303 , SER G:305 , ASP G:308
BINDING SITE FOR RESIDUE AMZ G 1001
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 4)
Info
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1: CBS (G:262-316)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CBS
PS51371
CBS domain profile.
AAKG_SCHPO
29-89
115-177
187-247
262-319
4
-
G:29-89
-
G:115-177
-
G:187-247
-
G:262-316
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(3, 8)
Info
All SCOP Domains
1a: SCOP_d2qreb_ (B:)
1b: SCOP_d2qred_ (D:)
2a: SCOP_d2qree1 (E:2-181)
2b: SCOP_d2qree2 (E:182-316)
2c: SCOP_d2qreg1 (G:2-181)
2d: SCOP_d2qreg2 (G:182-316)
3a: SCOP_d2qrea_ (A:)
3b: SCOP_d2qrec_ (C:)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
AMPKBI-like
(13)
Superfamily
:
AMPKBI-like
(13)
Family
:
AMPKBI-like
(13)
Protein domain
:
automated matches
(9)
Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
(4)
1a
d2qreb_
B:
1b
d2qred_
D:
Fold
:
CBS-domain pair
(75)
Superfamily
:
CBS-domain pair
(75)
Family
:
CBS-domain pair
(50)
Protein domain
:
automated matches
(11)
Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
(4)
2a
d2qree1
E:2-181
2b
d2qree2
E:182-316
2c
d2qreg1
G:2-181
2d
d2qreg2
G:182-316
Fold
:
TBP-like
(289)
Superfamily
:
KA1-like
(20)
Family
:
Ssp2 C-terminal domain-like
(16)
Protein domain
:
Snf1-like protein kinase ssp2
(6)
Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
(6)
3a
d2qrea_
A:
3b
d2qrec_
C:
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (172 KB)
Header - Asym.Unit
Biol.Unit 1 (83 KB)
Header - Biol.Unit 1
Biol.Unit 2 (84 KB)
Header - Biol.Unit 2
Biol.Unit 3 (163 KB)
Header - Biol.Unit 3
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