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2QOI
Asym. Unit
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Biol.Unit 1 (55 KB)
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(1)
Title
:
HUMAN EPHA3 KINASE AND JUXTAMEMBRANE REGION, Y596F:Y602F DOUBLE MUTANT
Authors
:
T. Davis, J. R. Walker, E. M. Newman, F. Mackenzie, C. Butler-Cole, J. Weigelt, M. Sundstrom, C. H. Arrowsmith, A. M. Edwards, A. Bochkarev, S. Dhe-Paganon, Structural Genomics Consortium (Sgc)
Date
:
20 Jul 07 (Deposition) - 21 Aug 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.25
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Receptor Tyrosine Kinase, Juxtamembrane Segment, Structural Genomics, Mutants, Structural Genomics Consortium, Sgc, Atp- Binding, Nucleotide-Binding, Phosphorylation, Transferase, Transmembrane, Tyrosine-Protein Kinase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. L. Davis, J. R. Walker, P. Loppnau, C. Butler-Cole, A. Allali-Hassani, S. Dhe-Paganon
Autoregulation By The Juxtamembrane Region Of The Human Ephrin Receptor Tyrosine Kinase A3 (Epha3).
Structure V. 16 873 2008
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: BETA-MERCAPTOETHANOL (BMEa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BME
1
Ligand/Ion
BETA-MERCAPTOETHANOL
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:636 , ILE A:652 , THR A:654 , HOH A:1105
BINDING SITE FOR RESIDUE BME A 1
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SAPs(SNPs)/Variants
(5, 5)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_036088 (I621L, chain A, )
2: VAR_EPHA3_HUMAN_CCDS2922_1_03 (I621L, chain A, )
3: VAR_065831 (T660K, chain A, )
4: VAR_036089 (D806N, chain A, )
5: VAR_EPHA3_HUMAN_CCDS2922_1_04 (D806N, chain A, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_036088
I
621
L
EPHA3_HUMAN
Unclassified
---
A
I
621
L
2
CancerSNP
VAR_EPHA3_HUMAN_CCDS2922_1_03
*
I
621
L
EPHA3_HUMAN
Disease (Colorectal cancer)
---
A
I
621
L
3
UniProt
VAR_065831
T
660
K
EPHA3_HUMAN
Unclassified
---
A
T
660
K
4
UniProt
VAR_036089
D
806
N
EPHA3_HUMAN
Unclassified
---
A
D
806
N
5
CancerSNP
VAR_EPHA3_HUMAN_CCDS2922_1_04
*
D
806
N
EPHA3_HUMAN
Disease (Colorectal cancer)
---
A
D
806
N
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:627-653)
2: PROTEIN_KINASE_TYR (A:742-754)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
EPHA3_HUMAN
627-653
1
A:627-653
2
PROTEIN_KINASE_TYR
PS00109
Tyrosine protein kinases specific active-site signature.
EPHA3_HUMAN
742-754
1
A:742-754
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2qoia_ (A:)
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Protein Domains
(
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
automated matches
(529)
Protein domain
:
automated matches
(529)
Human (Homo sapiens) [TaxId: 9606]
(438)
1a
d2qoia_
A:
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_2qoiA01 (A:595-701)
2a: CATH_2qoiA02 (A:702-904)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
2qoiA01
A:595-701
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
2a
2qoiA02
A:702-904
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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