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2QME
Biol. Unit 1
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Asym.Unit (45 KB)
Biol.Unit 1 (39 KB)
Biol.Unit 2 (76 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN RAC3 IN COMPLEX WITH CRIB DOMAIN OF HUMAN P21-ACTIVATED KINASE 1 (PAK1)
Authors
:
E. Ugochukwu, X. Yang, J. M. Elkins, N. Burgess-Brown, G. Bunkoczi, M. S C. H. Arrowsmith, J. Weigelt, A. Edwards, F. Von Delft, S. Knapp, D. Do Structural Genomics Consortium (Sgc)
Date
:
16 Jul 07 (Deposition) - 28 Aug 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.75
Chains
:
Asym. Unit : A,I
Biol. Unit 1: A,I (1x)
Biol. Unit 2: A,I (2x)
Keywords
:
Gtpase Rac3, Small Gtp Binding Protein, P21 Rac, Ras-Related C3 Botulinum Toxin Substrate 3, Signaling Protein, Crib, Kinase, Structural Genomics, Structural Genomics Consortium, Sgc, Cell Projection, Gtp-Binding, Lipoprotein, Membrane, Methylation, Nucleotide-Binding, Prenylation, Allosteric Enzyme, Atp-Binding, Phosphorylation, Serine/Threonine-Protein Kinase, Transferase, Apoptosis, Cell Junction, Signaling Protein-Transferase Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Ugochukwu, X. Yang, J. M. Elkins, N. Burgess-Brown, G. Bunkoczi, S. Knapp, D. Doyle
The Crystal Structure Of The Human Rac3 In Complex With The Crib Domain Of Human P21-Activated Kinase 1 (Pak1).
To Be Published
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: PHOSPHOMETHYLPHOSPHONIC ACID GUANY... (GCPa)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
3a: MAGNESIUM ION (MGa)
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No.
Name
Count
Type
Full Name
1
GCP
1
Ligand/Ion
PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
2
GOL
2
Ligand/Ion
GLYCEROL
3
MG
-1
Ligand/Ion
MAGNESIUM ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:17 , THR A:35 , GCP A:200 , HOH A:477 , HOH A:509
BINDING SITE FOR RESIDUE MG A 179
2
AC2
SOFTWARE
ALA A:13 , VAL A:14 , GLY A:15 , LYS A:16 , THR A:17 , CYS A:18 , PHE A:28 , TYR A:32 , PRO A:34 , THR A:35 , GLY A:60 , LYS A:116 , ASP A:118 , LEU A:119 , SER A:158 , ALA A:159 , LEU A:160 , MG A:179 , HOH A:303 , HOH A:309 , HOH A:319 , HOH A:331 , HOH A:338 , HOH A:347 , HOH A:359 , HOH A:391 , HOH A:477 , HOH A:509 , ALA I:27
BINDING SITE FOR RESIDUE GCP A 200
3
AC3
SOFTWARE
LYS A:166 , ASP A:170 , ARG A:174 , HOH A:489 , GLU I:10 , ILE I:11 , HOH I:53
BINDING SITE FOR RESIDUE GOL A 301
4
AC4
SOFTWARE
ARG A:163 , GLY A:164 , LEU A:165 , LYS A:166 , THR A:167 , HOH A:453
BINDING SITE FOR RESIDUE GOL A 302
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: RHO (A:1-176)
2: CRIB (I:11-24)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RHO
PS51420
small GTPase Rho family profile.
RAC3_HUMAN
1-176
1
A:1-176
2
CRIB
PS50108
CRIB domain profile.
PAK1_HUMAN
75-88
1
I:11-24
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2qmea_ (A:)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
automated matches
(173)
Human (Homo sapiens) [TaxId: 9606]
(112)
1a
d2qmea_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2qmeA00 (A:1-178)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
1a
2qmeA00
A:1-178
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_Ras_2qmeA01 (A:5-177)
2a: PFAM_PBD_2qmeI01 (I:10-33)
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(
)
Clan
:
P-loop_NTPase
(1112)
Family
:
Ras
(176)
Homo sapiens (Human)
(141)
1a
Ras-2qmeA01
A:5-177
Clan
:
no clan defined [family: PBD]
(6)
Family
:
PBD
(6)
Homo sapiens (Human)
(6)
2a
PBD-2qmeI01
I:10-33
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Asymmetric Unit 1
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