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2QLP
Asym. Unit
Info
Asym.Unit (158 KB)
Biol.Unit 1 (78 KB)
Biol.Unit 2 (77 KB)
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(1)
Title
:
BIFUNCTIONAL DCTP DEAMINASE:DUTPASE FROM MYCOBACTERIUM TUBERCULOSIS, APO FORM
Authors
:
S. Christophersen, P. Harris, M. Willemoes
Date
:
13 Jul 07 (Deposition) - 19 Feb 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.47
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Keywords
:
Distorted Beta Barrel, Hydrolase, Nucleotide Metabolism
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
S. S. Helt, M. Thymark, P. Harris, C. Aagaard, J. Dietrich, S. Larsen, M. Willemoes
Mechanism Of Dttp Inhibition Of The Bifunctional Dctp Deaminase:Dutpase Encoded By Mycobacterium Tuberculosis
J. Mol. Biol. V. 376 554 2007
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Hetero Components
(1, 7)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
1b: PENTAETHYLENE GLYCOL (1PEb)
1c: PENTAETHYLENE GLYCOL (1PEc)
1d: PENTAETHYLENE GLYCOL (1PEd)
1e: PENTAETHYLENE GLYCOL (1PEe)
1f: PENTAETHYLENE GLYCOL (1PEf)
1g: PENTAETHYLENE GLYCOL (1PEg)
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Label:
No.
Name
Count
Type
Full Name
1
1PE
7
Ligand/Ion
PENTAETHYLENE GLYCOL
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:106 , LEU A:107 , ARG C:41 , LEU C:81 , SER C:83
BINDING SITE FOR RESIDUE 1PE A 162
2
AC2
SOFTWARE
ARG A:41
BINDING SITE FOR RESIDUE 1PE A 163
3
AC3
SOFTWARE
ARG B:41 , SER B:83 , THR B:127 , ARG C:106
BINDING SITE FOR RESIDUE 1PE B 162
4
AC4
SOFTWARE
GLN C:65 , VAL C:67 , ASP C:68
BINDING SITE FOR RESIDUE 1PE C 162
5
AC5
SOFTWARE
ARG D:41 , GLY D:82 , SER D:83 , ARG E:106
BINDING SITE FOR RESIDUE 1PE D 162
6
AC6
SOFTWARE
ARG E:41 , LEU E:81 , GLY E:82 , THR E:127
BINDING SITE FOR RESIDUE 1PE E 162
7
AC7
SOFTWARE
ARG D:106 , ARG F:41 , SER F:83
BINDING SITE FOR RESIDUE 1PE F 162
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d2qlpa_ (A:)
1b: SCOP_d2qlpb_ (B:)
1c: SCOP_d2qlpc_ (C:)
1d: SCOP_d2qlpd_ (D:)
1e: SCOP_d2qlpe_ (E:)
1f: SCOP_d2qlpf_ (F:)
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Class
:
All beta proteins
(24004)
Fold
:
beta-clip
(280)
Superfamily
:
dUTPase-like
(122)
Family
:
dUTPase-like
(71)
Protein domain
:
Deoxycytidine triphosphate deaminase (dCTP deaminase)
(9)
Mycobacterium tuberculosis [TaxId: 83332]
(3)
1a
d2qlpa_
A:
1b
d2qlpb_
B:
1c
d2qlpc_
C:
1d
d2qlpd_
D:
1e
d2qlpe_
E:
1f
d2qlpf_
F:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 6)
Info
all PFAM domains
1a: PFAM_dUTPase_2qlpF01 (F:52-158)
1b: PFAM_dUTPase_2qlpF02 (F:52-158)
1c: PFAM_dUTPase_2qlpF03 (F:52-158)
1d: PFAM_dUTPase_2qlpF04 (F:52-158)
1e: PFAM_dUTPase_2qlpF05 (F:52-158)
1f: PFAM_dUTPase_2qlpF06 (F:52-158)
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Clan
:
dUTPase
(38)
Family
:
dUTPase
(38)
Mycobacterium tuberculosis
(9)
1a
dUTPase-2qlpF01
F:52-158
1b
dUTPase-2qlpF02
F:52-158
1c
dUTPase-2qlpF03
F:52-158
1d
dUTPase-2qlpF04
F:52-158
1e
dUTPase-2qlpF05
F:52-158
1f
dUTPase-2qlpF06
F:52-158
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Asym.Unit (158 KB)
Header - Asym.Unit
Biol.Unit 1 (78 KB)
Header - Biol.Unit 1
Biol.Unit 2 (77 KB)
Header - Biol.Unit 2
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