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2QJ6
Asym. Unit
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Asym.Unit (111 KB)
Biol.Unit 1 (54 KB)
Biol.Unit 2 (54 KB)
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(1)
Title
:
CRYSTAL STRUCTURE ANALYSIS OF A 14 REPEAT C-TERMINAL FRAGMENT OF TOXIN TCDA IN CLOSTRIDIUM DIFFICILE
Authors
:
D. Albesa-Jove, T. Bertrand, L. Carpenter, J. Lim, K. A. Brown, N. Fairweather
Date
:
06 Jul 07 (Deposition) - 15 Jul 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Clostridial Repetitive Oligo Peptides, Toxin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Albesa-Jove, T. Bertrand, L. Carpenter, J. Lim, E. Martinez, J. Zhang, I. Dmitri, K. A. Brown, N. Fairweather
Solution And Crystal Structures Of The Cell Binding Domain Of Toxins Tcda And Tcdb From Clostridium Difficile
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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PROSITE Patterns/Profiles
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1: CW (-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|...)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CW
PS51170
Cell wall-binding repeat profile.
TOXA_CLODI
1810-1829
1851-1870
1872-1891
1923-1942
1943-1962
1964-1983
1985-2004
2006-2025
2057-2076
2077-2096
2098-2117
2119-2138
2140-2159
2191-2210
2211-2230
2232-2251
2252-2271
2305-2324
2325-2344
2346-2365
2367-2386
2388-2407
2439-2458
2459-2478
2480-2499
2501-2520
2572-2591
2552-2571
2593-2612
2663-2682
2643-2662
2685-2704
20
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
A:65-84
B:65-84
A:85-104
B:85-104
A:106-125
B:106-125
A:127-146
B:127-146
A:198-217
B:198-217
A:178-197
B:178-197
A:219-238
B:219-238
A:289-308
B:289-308
A:269-288
B:269-288
A:311-330
B:311-330
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Pfam Domains
(1, 6)
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all PFAM domains
1a: PFAM_CW_binding_1_2qj6B01 (B:290-305)
1b: PFAM_CW_binding_1_2qj6B02 (B:290-305)
1c: PFAM_CW_binding_1_2qj6B03 (B:290-305)
1d: PFAM_CW_binding_1_2qj6B04 (B:290-305)
1e: PFAM_CW_binding_1_2qj6B05 (B:290-305)
1f: PFAM_CW_binding_1_2qj6B06 (B:290-305)
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Clan
:
no clan defined [family: CW_binding_1]
(12)
Family
:
CW_binding_1
(12)
Clostridium difficile
(1)
1a
CW_binding_1-2qj6B01
B:290-305
1b
CW_binding_1-2qj6B02
B:290-305
1c
CW_binding_1-2qj6B03
B:290-305
1d
CW_binding_1-2qj6B04
B:290-305
1e
CW_binding_1-2qj6B05
B:290-305
1f
CW_binding_1-2qj6B06
B:290-305
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Asym.Unit (111 KB)
Header - Asym.Unit
Biol.Unit 1 (54 KB)
Header - Biol.Unit 1
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