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2QFE
Asym. Unit
Info
Asym.Unit (32 KB)
Biol.Unit 1 (27 KB)
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(1)
Title
:
DISTAL C2-LIKE DOMAIN OF HUMAN CALPAIN-7
Authors
:
J. R. Walker, D. Cuerrier, R. Ravulapalli, J. Weigelt, C. H. Arrowsmith, A. M. Edwards, A. Bochkarev, S. Dhe-Paganon
Date
:
27 Jun 07 (Deposition) - 10 Jul 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.45
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
C2-Like Domain, Hydrolase; Nuclear Protein; Protease; Thiol Protease
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. R. Walker, D. Cuerrier, R. Ravulapalli, J. Weigelt, C. H. Arrowsmith, A. M. Edwards, A. Bochkarev, S. Dhe-Paganon
Structure Of The C2 Domain Of Human Calpain-7
To Be Published
(for further references see the
PDB file header
)
[
close entry info
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Hetero Components
(1, 18)
Info
All Hetero Components
1a: BROMIDE ION (BRa)
1b: BROMIDE ION (BRb)
1c: BROMIDE ION (BRc)
1d: BROMIDE ION (BRd)
1e: BROMIDE ION (BRe)
1f: BROMIDE ION (BRf)
1g: BROMIDE ION (BRg)
1h: BROMIDE ION (BRh)
1i: BROMIDE ION (BRi)
1j: BROMIDE ION (BRj)
1k: BROMIDE ION (BRk)
1l: BROMIDE ION (BRl)
1m: BROMIDE ION (BRm)
1n: BROMIDE ION (BRn)
1o: BROMIDE ION (BRo)
1p: BROMIDE ION (BRp)
1q: BROMIDE ION (BRq)
1r: BROMIDE ION (BRr)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BR
18
Ligand/Ion
BROMIDE ION
[
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]
Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:736 , ASN A:783
BINDING SITE FOR RESIDUE BR A 1
02
AC2
SOFTWARE
HOH A:56 , ARG A:732
BINDING SITE FOR RESIDUE BR A 3
03
AC3
SOFTWARE
ARG A:691 , ARG A:732 , PHE A:798
BINDING SITE FOR RESIDUE BR A 4
04
AC4
SOFTWARE
SER A:676
BINDING SITE FOR RESIDUE BR A 5
05
AC5
SOFTWARE
LYS A:690 , ILE A:809
BINDING SITE FOR RESIDUE BR A 7
06
AC6
SOFTWARE
HOH A:93
BINDING SITE FOR RESIDUE BR A 8
07
AC7
SOFTWARE
HOH A:37 , HOH A:161 , ASN A:776
BINDING SITE FOR RESIDUE BR A 9
08
AC8
SOFTWARE
ARG A:759
BINDING SITE FOR RESIDUE BR A 10
09
AC9
SOFTWARE
HOH A:34 , SER A:762 , ASP A:764 , ARG A:766
BINDING SITE FOR RESIDUE BR A 11
10
BC1
SOFTWARE
TYR A:765
BINDING SITE FOR RESIDUE BR A 12
11
BC2
SOFTWARE
PHE A:707 , GLN A:708 , GLU A:709
BINDING SITE FOR RESIDUE BR A 13
12
BC3
SOFTWARE
GLN A:708 , LYS A:712 , GLU A:773
BINDING SITE FOR RESIDUE BR A 14
13
BC4
SOFTWARE
GLN A:811
BINDING SITE FOR RESIDUE BR A 15
14
BC5
SOFTWARE
HOH A:64 , HOH A:98 , HOH A:124 , CYS A:767
BINDING SITE FOR RESIDUE BR A 16
15
BC6
SOFTWARE
GLN A:699
BINDING SITE FOR RESIDUE BR A 17
16
BC7
SOFTWARE
LYS A:760 , SER A:761
BINDING SITE FOR RESIDUE BR A 18
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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Exons
(5, 5)
Info
All Exons
Exon 1.19 (A:675-683)
Exon 1.20b (A:684-691)
Exon 1.21b (A:692-735)
Exon 1.22a (A:735-766)
Exon 1.23d (A:766-813)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.18/1.19
2: Boundary 1.19/1.20b
3: Boundary 1.20b/1.21b
4: Boundary 1.21b/1.22a
5: Boundary 1.22a/1.23d
6: Boundary 1.23d/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000253693
1c
ENSE00000901305
chr3:
15247750-15248104
355
CAN7_HUMAN
1-34
34
0
-
-
1.3
ENST00000253693
3
ENSE00001772143
chr3:
15253611-15253719
109
CAN7_HUMAN
35-71
37
0
-
-
1.4b
ENST00000253693
4b
ENSE00001772477
chr3:
15258932-15259089
158
CAN7_HUMAN
71-123
53
0
-
-
1.5
ENST00000253693
5
ENSE00001641121
chr3:
15259980-15260047
68
CAN7_HUMAN
124-146
23
0
-
-
1.6a
ENST00000253693
6a
ENSE00001149507
chr3:
15262288-15262488
201
CAN7_HUMAN
146-213
68
0
-
-
1.7
ENST00000253693
7
ENSE00001713631
chr3:
15264982-15265068
87
CAN7_HUMAN
213-242
30
0
-
-
1.8a
ENST00000253693
8a
ENSE00001700421
chr3:
15269346-15269472
127
CAN7_HUMAN
242-284
43
0
-
-
1.9
ENST00000253693
9
ENSE00001803695
chr3:
15270481-15270566
86
CAN7_HUMAN
285-313
29
0
-
-
1.10
ENST00000253693
10
ENSE00001665389
chr3:
15271949-15272042
94
CAN7_HUMAN
313-344
32
0
-
-
1.12
ENST00000253693
12
ENSE00001653102
chr3:
15274026-15274172
147
CAN7_HUMAN
345-393
49
0
-
-
1.13
ENST00000253693
13
ENSE00001776600
chr3:
15275374-15275480
107
CAN7_HUMAN
394-429
36
0
-
-
1.14
ENST00000253693
14
ENSE00001731020
chr3:
15276532-15276652
121
CAN7_HUMAN
429-469
41
0
-
-
1.15b
ENST00000253693
15b
ENSE00001780897
chr3:
15281980-15282124
145
CAN7_HUMAN
470-518
49
0
-
-
1.16
ENST00000253693
16
ENSE00001640361
chr3:
15282261-15282360
100
CAN7_HUMAN
518-551
34
0
-
-
1.17
ENST00000253693
17
ENSE00000901319
chr3:
15282960-15283095
136
CAN7_HUMAN
551-596
46
0
-
-
1.18
ENST00000253693
18
ENSE00001605792
chr3:
15283685-15283760
76
CAN7_HUMAN
597-622
26
0
-
-
1.19
ENST00000253693
19
ENSE00001796602
chr3:
15287033-15287178
146
CAN7_HUMAN
622-670
49
1
A:675-683
9
1.20b
ENST00000253693
20b
ENSE00001772398
chr3:
15288239-15288301
63
CAN7_HUMAN
671-691
21
1
A:684-691
8
1.21b
ENST00000253693
21b
ENSE00001628583
chr3:
15288834-15288964
131
CAN7_HUMAN
692-735
44
1
A:692-735
44
1.22a
ENST00000253693
22a
ENSE00000901324
chr3:
15292438-15292530
93
CAN7_HUMAN
735-766
32
1
A:735-766
32
1.23d
ENST00000253693
23d
ENSE00001241433
chr3:
15292623-15294425
1803
CAN7_HUMAN
766-813
48
1
A:766-813
48
[
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SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Calpain_III_2qfeA01 (A:687-810)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: Calpain_III]
(5)
Family
:
Calpain_III
(5)
Homo sapiens (Human)
(3)
1a
Calpain_III-2qfeA01
A:687-810
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Chain A
Asymmetric Unit 1
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