PLEASE WAIT...
Getting 'Biological Unit' information from database.
PLEASE WAIT...
Getting 'Hetero Component' information from database.
PLEASE WAIT...
Getting 'Site' information from database.
PLEASE WAIT...
Getting 'PROSITE' information from database.
PLEASE WAIT...
Getting 'Exon' information from database.
2QC8
Asym. Unit
Info
Asym.Unit (592 KB)
Biol.Unit 1 (574 KB)
(using Jmol or JSmol)
spin
show selected part
auto zoom/center
Standard Views
(
Basic
|
Advanced
Interface
)
(
Basic
|
Advanced
Interface
)
Help
(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN GLUTAMINE SYNTHETASE IN COMPLEX WITH ADP AND METHIONINE SULFOXIMINE PHOSPHATE
Authors
:
T. Karlberg, L. Lehtio, C. H. Arrowsmith, H. Berglund, R. D. Busam, R. Co L. G. Dahlgren, A. Edwards, S. Flodin, A. Flores, S. Graslund, M. Hamma M. Hogbom, I. Johansson, A. Kallas, T. Kotenyova, M. Moche, P. Nordlun T. Nyman, C. Persson, J. Sagemark, M. Sundstrom, A. G. Thorsell, S. Van Berg, J. Weigelt, L. Holmberg-Schiavone, Structural Genomics Con (Sgc)
Date
:
19 Jun 07 (Deposition) - 03 Jul 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J (1x)
Keywords
:
Amino-Acid Biosynthesis, Ligase, Synthetase, Structural Genomics, Structural Genomics Consortium, Sgc
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
W. W. Krajewski, R. Collins, L. Holmberg-Schiavone, T. A. Jones, T. Karlberg, S. L. Mowbray
Crystal Structures Of Mammalian Glutamine Synthetases Illustrate Substrate-Induced Conformational Changes And Provide Opportunities For Drug And Herbicide Design.
J. Mol. Biol. V. 375 217 2008
[
close entry info
]
Hetero Components
(4, 60)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
1c: ADENOSINE-5'-DIPHOSPHATE (ADPc)
1d: ADENOSINE-5'-DIPHOSPHATE (ADPd)
1e: ADENOSINE-5'-DIPHOSPHATE (ADPe)
1f: ADENOSINE-5'-DIPHOSPHATE (ADPf)
1g: ADENOSINE-5'-DIPHOSPHATE (ADPg)
1h: ADENOSINE-5'-DIPHOSPHATE (ADPh)
1i: ADENOSINE-5'-DIPHOSPHATE (ADPi)
1j: ADENOSINE-5'-DIPHOSPHATE (ADPj)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
2f: CHLORIDE ION (CLf)
2g: CHLORIDE ION (CLg)
2h: CHLORIDE ION (CLh)
2i: CHLORIDE ION (CLi)
2j: CHLORIDE ION (CLj)
3a: MANGANESE (II) ION (MNa)
3aa: MANGANESE (II) ION (MNaa)
3ab: MANGANESE (II) ION (MNab)
3ac: MANGANESE (II) ION (MNac)
3ad: MANGANESE (II) ION (MNad)
3b: MANGANESE (II) ION (MNb)
3c: MANGANESE (II) ION (MNc)
3d: MANGANESE (II) ION (MNd)
3e: MANGANESE (II) ION (MNe)
3f: MANGANESE (II) ION (MNf)
3g: MANGANESE (II) ION (MNg)
3h: MANGANESE (II) ION (MNh)
3i: MANGANESE (II) ION (MNi)
3j: MANGANESE (II) ION (MNj)
3k: MANGANESE (II) ION (MNk)
3l: MANGANESE (II) ION (MNl)
3m: MANGANESE (II) ION (MNm)
3n: MANGANESE (II) ION (MNn)
3o: MANGANESE (II) ION (MNo)
3p: MANGANESE (II) ION (MNp)
3q: MANGANESE (II) ION (MNq)
3r: MANGANESE (II) ION (MNr)
3s: MANGANESE (II) ION (MNs)
3t: MANGANESE (II) ION (MNt)
3u: MANGANESE (II) ION (MNu)
3v: MANGANESE (II) ION (MNv)
3w: MANGANESE (II) ION (MNw)
3x: MANGANESE (II) ION (MNx)
3y: MANGANESE (II) ION (MNy)
3z: MANGANESE (II) ION (MNz)
4a: L-METHIONINE-S-SULFOXIMINE PHOSPHA... (P3Sa)
4b: L-METHIONINE-S-SULFOXIMINE PHOSPHA... (P3Sb)
4c: L-METHIONINE-S-SULFOXIMINE PHOSPHA... (P3Sc)
4d: L-METHIONINE-S-SULFOXIMINE PHOSPHA... (P3Sd)
4e: L-METHIONINE-S-SULFOXIMINE PHOSPHA... (P3Se)
4f: L-METHIONINE-S-SULFOXIMINE PHOSPHA... (P3Sf)
4g: L-METHIONINE-S-SULFOXIMINE PHOSPHA... (P3Sg)
4h: L-METHIONINE-S-SULFOXIMINE PHOSPHA... (P3Sh)
4i: L-METHIONINE-S-SULFOXIMINE PHOSPHA... (P3Si)
4j: L-METHIONINE-S-SULFOXIMINE PHOSPHA... (P3Sj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADP
10
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
CL
10
Ligand/Ion
CHLORIDE ION
3
MN
30
Ligand/Ion
MANGANESE (II) ION
4
P3S
10
Ligand/Ion
L-METHIONINE-S-SULFOXIMINE PHOSPHATE
[
close Hetero Component info
]
Sites
(60, 60)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:136 , GLU A:196 , GLU A:203 , MN A:403 , P3S A:601 , HOH A:704
BINDING SITE FOR RESIDUE MN A 401
02
AC2
SOFTWARE
GLU A:134 , HIS A:253 , GLU A:338 , ARG A:340 , ADP A:501 , P3S A:601
BINDING SITE FOR RESIDUE MN A 402
03
AC3
SOFTWARE
GLU A:134 , GLU A:203 , MN A:401 , ADP A:501 , P3S A:601 , HOH A:729
BINDING SITE FOR RESIDUE MN A 403
04
AC4
SOFTWARE
GLU B:136 , GLU B:196 , GLU B:203 , MN B:403 , P3S B:601 , HOH B:744
BINDING SITE FOR RESIDUE MN B 401
05
AC5
SOFTWARE
GLU B:134 , HIS B:253 , GLU B:338 , ARG B:340 , MN B:403 , ADP B:501 , P3S B:601
BINDING SITE FOR RESIDUE MN B 402
06
AC6
SOFTWARE
GLU B:134 , GLU B:203 , MN B:401 , MN B:402 , ADP B:501 , P3S B:601 , HOH B:741
BINDING SITE FOR RESIDUE MN B 403
07
AC7
SOFTWARE
GLU C:136 , GLU C:196 , GLU C:203 , MN C:403 , P3S C:601 , HOH C:740
BINDING SITE FOR RESIDUE MN C 401
08
AC8
SOFTWARE
GLU C:134 , HIS C:253 , GLU C:338 , ARG C:340 , ADP C:501 , P3S C:601
BINDING SITE FOR RESIDUE MN C 402
09
AC9
SOFTWARE
GLU C:134 , GLU C:203 , MN C:401 , ADP C:501 , P3S C:601 , HOH C:738
BINDING SITE FOR RESIDUE MN C 403
10
BC1
SOFTWARE
GLU D:136 , GLU D:196 , GLU D:203 , MN D:403 , P3S D:601
BINDING SITE FOR RESIDUE MN D 401
11
BC2
SOFTWARE
GLU D:134 , HIS D:253 , GLU D:338 , ADP D:501 , P3S D:601
BINDING SITE FOR RESIDUE MN D 402
12
BC3
SOFTWARE
GLU D:134 , GLU D:203 , MN D:401 , ADP D:501 , P3S D:601 , HOH D:747
BINDING SITE FOR RESIDUE MN D 403
13
BC4
SOFTWARE
GLU E:136 , GLU E:196 , GLU E:203 , P3S E:601 , HOH E:629
BINDING SITE FOR RESIDUE MN E 401
14
BC5
SOFTWARE
GLU E:134 , HIS E:253 , GLU E:338 , ARG E:340 , ADP E:501 , P3S E:601
BINDING SITE FOR RESIDUE MN E 402
15
BC6
SOFTWARE
GLU E:134 , GLU E:203 , ADP E:501 , P3S E:601 , HOH E:627
BINDING SITE FOR RESIDUE MN E 403
16
BC7
SOFTWARE
GLU F:136 , GLU F:196 , GLU F:203 , MN F:403 , P3S F:601
BINDING SITE FOR RESIDUE MN F 401
17
BC8
SOFTWARE
GLU F:134 , HIS F:253 , GLU F:338 , ARG F:340 , ADP F:501 , P3S F:601
BINDING SITE FOR RESIDUE MN F 402
18
BC9
SOFTWARE
GLU F:134 , GLU F:203 , MN F:401 , ADP F:501 , P3S F:601 , HOH F:717
BINDING SITE FOR RESIDUE MN F 403
19
CC1
SOFTWARE
GLU G:136 , GLU G:196 , GLU G:203 , MN G:403 , P3S G:601
BINDING SITE FOR RESIDUE MN G 401
20
CC2
SOFTWARE
GLU G:134 , HIS G:253 , GLU G:338 , ADP G:501 , P3S G:601
BINDING SITE FOR RESIDUE MN G 402
21
CC3
SOFTWARE
GLU G:134 , GLU G:203 , MN G:401 , ADP G:501 , P3S G:601
BINDING SITE FOR RESIDUE MN G 403
22
CC4
SOFTWARE
GLU H:136 , GLU H:196 , GLU H:203 , MN H:403 , P3S H:601 , HOH H:609
BINDING SITE FOR RESIDUE MN H 401
23
CC5
SOFTWARE
GLU H:134 , HIS H:253 , GLU H:338 , MN H:403 , ADP H:501 , P3S H:601
BINDING SITE FOR RESIDUE MN H 402
24
CC6
SOFTWARE
GLU H:134 , GLU H:203 , MN H:401 , MN H:402 , ADP H:501 , P3S H:601 , HOH H:608
BINDING SITE FOR RESIDUE MN H 403
25
CC7
SOFTWARE
GLU I:136 , GLU I:196 , GLU I:203 , MN I:403 , P3S I:601
BINDING SITE FOR RESIDUE MN I 401
26
CC8
SOFTWARE
GLU I:134 , HIS I:253 , GLU I:338 , ARG I:340 , ADP I:501 , P3S I:601
BINDING SITE FOR RESIDUE MN I 402
27
CC9
SOFTWARE
GLU I:134 , GLU I:203 , MN I:401 , ADP I:501 , P3S I:601 , HOH I:718
BINDING SITE FOR RESIDUE MN I 403
28
DC1
SOFTWARE
GLU J:136 , GLU J:196 , GLU J:203 , MN J:403 , P3S J:601 , HOH J:718
BINDING SITE FOR RESIDUE MN J 401
29
DC2
SOFTWARE
GLU J:134 , HIS J:253 , GLU J:338 , ADP J:501 , P3S J:601
BINDING SITE FOR RESIDUE MN J 402
30
DC3
SOFTWARE
GLU J:134 , GLU J:203 , MN J:401 , ADP J:501 , P3S J:601 , HOH J:717
BINDING SITE FOR RESIDUE MN J 403
31
DC4
SOFTWARE
MET B:29 , THR B:44 , THR C:193
BINDING SITE FOR RESIDUE CL B 701
32
DC5
SOFTWARE
MET C:29 , THR C:44 , THR D:193 , HOH D:731
BINDING SITE FOR RESIDUE CL C 702
33
DC6
SOFTWARE
THR A:193 , MET E:29 , THR E:44
BINDING SITE FOR RESIDUE CL A 703
34
DC7
SOFTWARE
THR D:44 , THR E:193
BINDING SITE FOR RESIDUE CL D 704
35
DC8
SOFTWARE
MET A:29 , THR A:44 , THR B:193
BINDING SITE FOR RESIDUE CL B 705
36
DC9
SOFTWARE
THR F:193 , THR J:44
BINDING SITE FOR RESIDUE CL F 706
37
EC1
SOFTWARE
THR F:44 , THR G:193
BINDING SITE FOR RESIDUE CL G 707
38
EC2
SOFTWARE
MET G:29 , LYS G:43 , THR G:44 , THR H:193
BINDING SITE FOR RESIDUE CL G 708
39
EC3
SOFTWARE
THR H:44 , THR I:193
BINDING SITE FOR RESIDUE CL I 709
40
EC4
SOFTWARE
THR I:44 , THR J:193
BINDING SITE FOR RESIDUE CL J 710
41
EC5
SOFTWARE
TRP A:130 , GLY A:132 , GLU A:134 , GLU A:203 , GLN A:205 , GLY A:207 , PRO A:208 , ASN A:255 , SER A:257 , ARG A:262 , ARG A:319 , ARG A:324 , TYR A:336 , GLU A:338 , MN A:402 , MN A:403 , P3S A:601 , HOH A:729 , HOH A:730 , HOH A:731
BINDING SITE FOR RESIDUE ADP A 501
42
EC6
SOFTWARE
GLU A:134 , GLU A:136 , GLU A:196 , GLU A:203 , GLY A:249 , HIS A:253 , ARG A:299 , GLU A:305 , THR A:306 , ARG A:319 , GLU A:338 , ARG A:340 , MN A:401 , MN A:402 , MN A:403 , ADP A:501 , HOH A:704 , HOH A:729 , HOH A:733 , ASP E:63
BINDING SITE FOR RESIDUE P3S A 601
43
EC7
SOFTWARE
HOH A:732 , TRP B:130 , GLY B:132 , GLU B:134 , GLU B:203 , GLN B:205 , ILE B:206 , GLY B:207 , PRO B:208 , ASN B:255 , SER B:257 , ARG B:319 , ARG B:324 , TYR B:336 , GLU B:338 , MN B:402 , MN B:403 , P3S B:601 , HOH B:742
BINDING SITE FOR RESIDUE ADP B 501
44
EC8
SOFTWARE
ASP A:63 , GLU B:134 , GLU B:136 , TYR B:162 , GLU B:196 , GLU B:203 , GLY B:249 , HIS B:253 , ARG B:299 , GLU B:305 , THR B:306 , ARG B:319 , GLU B:338 , ARG B:340 , MN B:401 , MN B:402 , MN B:403 , ADP B:501 , HOH B:718 , HOH B:744
BINDING SITE FOR RESIDUE P3S B 601
45
EC9
SOFTWARE
TRP C:130 , GLY C:132 , GLU C:134 , GLU C:203 , GLN C:205 , GLY C:207 , PRO C:208 , ASN C:255 , SER C:257 , ARG C:324 , TYR C:336 , GLU C:338 , MN C:402 , MN C:403 , P3S C:601 , HOH C:709 , HOH C:736 , HOH C:738 , HOH C:739
BINDING SITE FOR RESIDUE ADP C 501
46
FC1
SOFTWARE
ASP B:63 , GLU C:134 , GLU C:136 , TYR C:162 , GLU C:196 , GLU C:203 , GLY C:249 , HIS C:253 , ARG C:299 , GLU C:305 , THR C:306 , ARG C:319 , GLU C:338 , ARG C:340 , MN C:401 , MN C:402 , MN C:403 , ADP C:501 , HOH C:704 , HOH C:730 , HOH C:740
BINDING SITE FOR RESIDUE P3S C 601
47
FC2
SOFTWARE
HOH C:707 , TRP D:130 , GLY D:132 , GLU D:134 , GLU D:203 , GLN D:205 , GLY D:207 , PRO D:208 , ASN D:255 , SER D:257 , ARG D:319 , ARG D:324 , TYR D:336 , GLU D:338 , MN D:402 , MN D:403 , P3S D:601 , HOH D:747
BINDING SITE FOR RESIDUE ADP D 501
48
FC3
SOFTWARE
ASP C:63 , GLU D:134 , GLU D:136 , GLU D:196 , GLU D:203 , GLY D:249 , HIS D:253 , ARG D:299 , GLU D:305 , THR D:306 , ARG D:319 , GLU D:338 , ARG D:340 , MN D:401 , MN D:402 , MN D:403 , ADP D:501 , HOH D:711
BINDING SITE FOR RESIDUE P3S D 601
49
FC4
SOFTWARE
HOH D:749 , TRP E:130 , GLY E:132 , GLU E:134 , GLU E:203 , GLN E:205 , GLY E:207 , PRO E:208 , ASN E:255 , SER E:257 , ARG E:319 , ARG E:324 , TYR E:336 , GLU E:338 , MN E:402 , MN E:403 , P3S E:601 , HOH E:624 , HOH E:627 , HOH E:628
BINDING SITE FOR RESIDUE ADP E 501
50
FC5
SOFTWARE
ASP D:63 , GLU E:134 , GLU E:136 , GLU E:196 , GLU E:203 , GLY E:249 , HIS E:253 , ARG E:299 , GLU E:305 , THR E:306 , ARG E:319 , GLU E:338 , ARG E:340 , MN E:401 , MN E:402 , MN E:403 , ADP E:501 , HOH E:629
BINDING SITE FOR RESIDUE P3S E 601
51
FC6
SOFTWARE
TRP F:130 , GLY F:132 , GLU F:134 , ALA F:191 , GLU F:203 , GLN F:205 , ILE F:206 , GLY F:207 , PRO F:208 , ASN F:255 , SER F:257 , ARG F:319 , ARG F:324 , TYR F:336 , GLU F:338 , MN F:402 , MN F:403 , P3S F:601 , HOH F:717 , HOH F:718
BINDING SITE FOR RESIDUE ADP F 501
52
FC7
SOFTWARE
GLU F:134 , GLU F:136 , GLU F:196 , GLU F:203 , GLY F:249 , HIS F:253 , ARG F:299 , GLU F:305 , THR F:306 , ARG F:319 , ARG F:340 , MN F:401 , MN F:402 , MN F:403 , ADP F:501 , HOH F:712 , HOH F:717 , ASP J:63
BINDING SITE FOR RESIDUE P3S F 601
53
FC8
SOFTWARE
TRP G:130 , GLY G:132 , GLU G:134 , ALA G:191 , GLU G:203 , GLN G:205 , ILE G:206 , GLY G:207 , PRO G:208 , ASN G:255 , SER G:257 , ARG G:319 , ARG G:324 , TYR G:336 , GLU G:338 , MN G:402 , MN G:403 , P3S G:601
BINDING SITE FOR RESIDUE ADP G 501
54
FC9
SOFTWARE
ASP F:63 , GLU G:134 , GLU G:136 , GLU G:196 , GLU G:203 , ASN G:248 , GLY G:249 , HIS G:253 , ARG G:299 , GLU G:305 , THR G:306 , ARG G:319 , GLU G:338 , ARG G:340 , MN G:401 , MN G:402 , MN G:403 , ADP G:501
BINDING SITE FOR RESIDUE P3S G 601
55
GC1
SOFTWARE
GLY H:132 , GLU H:134 , ALA H:191 , GLU H:203 , GLN H:205 , GLY H:207 , PRO H:208 , ASN H:255 , SER H:257 , ARG H:319 , ARG H:324 , TYR H:336 , GLU H:338 , MN H:402 , MN H:403 , P3S H:601 , HOH H:608
BINDING SITE FOR RESIDUE ADP H 501
56
GC2
SOFTWARE
ASP G:63 , GLU H:134 , GLU H:136 , TYR H:162 , GLU H:196 , GLU H:203 , GLY H:249 , HIS H:253 , ARG H:299 , GLU H:305 , ARG H:319 , GLU H:338 , ARG H:340 , MN H:401 , MN H:402 , MN H:403 , ADP H:501 , HOH H:608
BINDING SITE FOR RESIDUE P3S H 601
57
GC3
SOFTWARE
TRP I:130 , GLY I:132 , GLU I:134 , GLU I:203 , GLN I:205 , ILE I:206 , GLY I:207 , PRO I:208 , ASN I:255 , SER I:257 , ARG I:319 , ARG I:324 , TYR I:336 , GLU I:338 , MN I:402 , MN I:403 , P3S I:601 , HOH I:718 , HOH I:719
BINDING SITE FOR RESIDUE ADP I 501
58
GC4
SOFTWARE
ASP H:63 , GLU I:134 , GLU I:136 , GLU I:196 , GLU I:203 , ASN I:248 , GLY I:249 , GLY I:251 , HIS I:253 , ARG I:299 , GLU I:305 , ARG I:319 , ARG I:324 , GLU I:338 , ARG I:340 , MN I:401 , MN I:402 , MN I:403 , ADP I:501
BINDING SITE FOR RESIDUE P3S I 601
59
GC5
SOFTWARE
TRP J:130 , GLY J:132 , GLU J:134 , ALA J:191 , GLU J:203 , GLN J:205 , GLY J:207 , PRO J:208 , ASN J:255 , SER J:257 , ARG J:319 , ARG J:324 , TYR J:336 , GLU J:338 , MN J:402 , MN J:403 , P3S J:601 , HOH J:717
BINDING SITE FOR RESIDUE ADP J 501
60
GC6
SOFTWARE
ASP I:63 , GLU J:134 , GLU J:136 , TYR J:162 , GLU J:196 , GLU J:203 , GLY J:249 , HIS J:253 , ARG J:299 , GLU J:305 , THR J:306 , ARG J:319 , GLU J:338 , ARG J:340 , MN J:401 , MN J:402 , MN J:403 , ADP J:501 , HOH J:714 , HOH J:718
BINDING SITE FOR RESIDUE P3S J 601
[
close Site info
]
SAPs(SNPs)/Variants
(2, 20)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_026560 (R324C, chain A/B/C/D/E/F/G/H/I/J, )
2: VAR_026561 (R341C, chain A/B/C/D/E/F/G/H/I/J, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_026560
R
324
C
GLNA_HUMAN
Disease (CSGD)
---
A/B/C/D/E/F/G/H/I/J
R
324
C
2
UniProt
VAR_026561
R
341
C
GLNA_HUMAN
Disease (CSGD)
---
A/B/C/D/E/F/G/H/I/J
R
341
C
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 20)
Info
All PROSITE Patterns/Profiles
1: GLNA_1 (A:62-79,B:62-79,C:62-79,D:62-79,E:...)
2: GLNA_ATP (A:241-257,B:241-257,C:241-257,D:24...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLNA_1
PS00180
Glutamine synthetase signature 1.
GLNA_HUMAN
62-79
10
A:62-79
B:62-79
C:62-79
D:62-79
E:62-79
F:62-79
G:62-79
H:62-79
I:62-79
J:62-79
2
GLNA_ATP
PS00181
Glutamine synthetase putative ATP-binding region signature.
GLNA_HUMAN
241-257
10
A:241-257
B:241-257
C:241-257
D:241-257
E:241-257
F:241-257
G:241-257
H:241-257
I:241-257
J:241-257
[
close PROSITE info
]
Exons
(6, 60)
Info
All Exons
Exon 1.2d (A:10-56 | B:10-56 | C:10-56 | D:10...)
Exon 1.3a (A:56-110 | B:56-110 | C:56-110 | D...)
Exon 1.3g (A:110-159 | B:110-159 | C:110-159 ...)
Exon 1.3j (A:159-201 | B:159-201 | C:159-201 ...)
Exon 1.3n (A:202-268 | B:202-268 | C:202-268 ...)
Exon 1.3q (A:268-365 | B:268-365 | C:268-365 ...)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.1c/1.2d
2: Boundary 1.2d/1.3a
3: Boundary 1.3a/1.3g
4: Boundary 1.3g/1.3j
5: Boundary 1.3j/1.3n
6: Boundary 1.3n/1.3q
7: Boundary 1.3q/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000339526
1c
ENSE00001384553
chr1:
182360927-182359632
1296
GLNA_HUMAN
-
0
0
-
-
1.2d
ENST00000339526
2d
ENSE00002174349
chr1:
182357885-182357707
179
GLNA_HUMAN
1-56
56
10
A:10-56
B:10-56
C:10-56
D:10-56
E:10-56
F:10-56
G:10-56
H:10-56
I:10-56
J:10-56
47
47
47
47
47
47
47
47
47
47
1.3a
ENST00000339526
3a
ENSE00000959313
chr1:
182356427-182356266
162
GLNA_HUMAN
56-110
55
10
A:56-110
B:56-110
C:56-110
D:56-110
E:56-110
F:56-110
G:56-110
H:56-110
I:56-110
J:56-110
55
55
55
55
55
55
55
55
55
55
1.3g
ENST00000339526
3g
ENSE00000922074
chr1:
182355537-182355391
147
GLNA_HUMAN
110-159
50
10
A:110-159
B:110-159
C:110-159
D:110-159
E:110-159
F:110-159
G:110-159
H:110-159
I:110-159
J:110-159
50
50
50
50
50
50
50
50
50
50
1.3j
ENST00000339526
3j
ENSE00001685102
chr1:
182355022-182354895
128
GLNA_HUMAN
159-201
43
10
A:159-201
B:159-201
C:159-201
D:159-201
E:159-201
F:159-201
G:159-201
H:159-201
I:159-201
J:159-201
43
43
43
43
43
43
43
43
43
43
1.3n
ENST00000339526
3n
ENSE00001634123
chr1:
182354691-182354492
200
GLNA_HUMAN
202-268
67
10
A:202-268
B:202-268
C:202-268
D:202-268
E:202-268
F:202-268
G:202-268
H:202-268
I:202-268
J:202-268
67
67
67
67
67
67
67
67
67
67
1.3q
ENST00000339526
3q
ENSE00001391185
chr1:
182353858-182352029
1830
GLNA_HUMAN
268-373
106
10
A:268-365
B:268-365
C:268-365
D:268-365
E:268-364
F:268-365
G:268-365
H:268-365
I:268-365
J:268-365
98
98
98
98
97
98
98
98
98
98
[
close EXON info
]
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
close CATH info
]
Pfam Domains
(2, 20)
Info
all PFAM domains
1a: PFAM_Gln_synt_C_2qc8J01 (J:110-359)
1b: PFAM_Gln_synt_C_2qc8J02 (J:110-359)
1c: PFAM_Gln_synt_C_2qc8J03 (J:110-359)
1d: PFAM_Gln_synt_C_2qc8J04 (J:110-359)
1e: PFAM_Gln_synt_C_2qc8J05 (J:110-359)
1f: PFAM_Gln_synt_C_2qc8J06 (J:110-359)
1g: PFAM_Gln_synt_C_2qc8J07 (J:110-359)
1h: PFAM_Gln_synt_C_2qc8J08 (J:110-359)
1i: PFAM_Gln_synt_C_2qc8J09 (J:110-359)
1j: PFAM_Gln_synt_C_2qc8J10 (J:110-359)
2a: PFAM_Gln_synt_N_2qc8J11 (J:24-104)
2b: PFAM_Gln_synt_N_2qc8J12 (J:24-104)
2c: PFAM_Gln_synt_N_2qc8J13 (J:24-104)
2d: PFAM_Gln_synt_N_2qc8J14 (J:24-104)
2e: PFAM_Gln_synt_N_2qc8J15 (J:24-104)
2f: PFAM_Gln_synt_N_2qc8J16 (J:24-104)
2g: PFAM_Gln_synt_N_2qc8J17 (J:24-104)
2h: PFAM_Gln_synt_N_2qc8J18 (J:24-104)
2i: PFAM_Gln_synt_N_2qc8J19 (J:24-104)
2j: PFAM_Gln_synt_N_2qc8J20 (J:24-104)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
GCS
(23)
Family
:
Gln-synt_C
(3)
Homo sapiens (Human)
(2)
1a
Gln-synt_C-2qc8J01
J:110-359
1b
Gln-synt_C-2qc8J02
J:110-359
1c
Gln-synt_C-2qc8J03
J:110-359
1d
Gln-synt_C-2qc8J04
J:110-359
1e
Gln-synt_C-2qc8J05
J:110-359
1f
Gln-synt_C-2qc8J06
J:110-359
1g
Gln-synt_C-2qc8J07
J:110-359
1h
Gln-synt_C-2qc8J08
J:110-359
1i
Gln-synt_C-2qc8J09
J:110-359
1j
Gln-synt_C-2qc8J10
J:110-359
Clan
:
no clan defined [family: Gln-synt_N]
(2)
Family
:
Gln-synt_N
(2)
Homo sapiens (Human)
(2)
2a
Gln-synt_N-2qc8J11
J:24-104
2b
Gln-synt_N-2qc8J12
J:24-104
2c
Gln-synt_N-2qc8J13
J:24-104
2d
Gln-synt_N-2qc8J14
J:24-104
2e
Gln-synt_N-2qc8J15
J:24-104
2f
Gln-synt_N-2qc8J16
J:24-104
2g
Gln-synt_N-2qc8J17
J:24-104
2h
Gln-synt_N-2qc8J18
J:24-104
2i
Gln-synt_N-2qc8J19
J:24-104
2j
Gln-synt_N-2qc8J20
J:24-104
[
close Pfam info
]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Chain B
Chain C
Chain D
Chain E
Chain F
Chain G
Chain H
Chain I
Chain J
Asymmetric Unit 1
Rendering
(selected part)
Molecule Coloring
(selected part)
by Chain (Asym. Unit)
by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
by SCOP Domain
by CATH Domain
by Pfam Domain
by Asymmetric Unit
by Exon
by Amino Acid
by Nucleotide
by Temperature
by Charge
by Rainbow (Group)
by Custom Color
Background Coloring
Choose
molecule
background
color...
[
close
]
RGB value
(e.g.: "#3cb371" or "60,179,113")
Stereo
Graphics Window
x
pixel
Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
[
close Script example commands
]
Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
QuickSearch:
by PDB,NDB,UniProt,PROSITE Code or
Search Term(s)
Show PDB file:
Asym.Unit (592 KB)
Header - Asym.Unit
Biol.Unit 1 (574 KB)
Header - Biol.Unit 1
Plain Text
HTML (compressed size)
use JSmol [Javascript]
use Jmol [Java applet]
Upload:
Select a local file
OR
Enter a remote file address
You can upload any molecular structure file format that is recognized by Jmol,
e.g.: PDB, mmCif, CIF, CML, MOL, XYZ
(also compressed with 'gzip', see the
Jmol documentation
for a complete list)
JenaLib Atlas Page
|
Sequence/Alignment View
2QC8
Jmol Script Commands
|
Jmol Color Schemes
|
Jmol Mouse Manual
|
Jmol Wiki
controls:
collapse
expand
Home
JenaLib
Jmol Scripting
Contact
Help
