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2Q8M
Asym. Unit
Info
Asym.Unit (116 KB)
Biol.Unit 1 (214 KB)
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(1)
Title
:
T-LIKE FRUCTOSE-1,6-BISPHOSPHATASE FROM ESCHERICHIA COLI WITH AMP, GLUCOSE 6-PHOSPHATE, AND FRUCTOSE 1,6-BISPHOSPHATE BOUND
Authors
:
J. K. Hines, C. E. Kruesel, H. J. Fromm, R. B. Honzatko
Date
:
11 Jun 07 (Deposition) - 19 Jun 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Glycolysis, Gluconeogenesis, Bacteria, Carbohydrate Metabolism, Diabetes, Protein-Protein Interactions, Proteobacteria, Gram- Negative, Protein Crystallography, Heterotrophic, Allosteric Regulation, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. K. Hines, C. E. Kruesel, H. J. Fromm, R. B. Honzatko
Structure Of Inhibited Fructose-1, 6-Bisphosphatase From Escherichia Coli: Distinct Allosteric Inhibition Sites For Amp And Glucose 6-Phosphate And The Characterization Of A Gluconeogenic Switch.
J. Biol. Chem. V. 282 24697 2007
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Hetero Components
(6, 24)
Info
All Hetero Components
1a: ADENOSINE MONOPHOSPHATE (AMPa)
1b: ADENOSINE MONOPHOSPHATE (AMPb)
2a: BETA-D-GLUCOSE-6-PHOSPHATE (BG6a)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
3c: CHLORIDE ION (CLc)
4a: BETA-FRUCTOSE-1,6-DIPHOSPHATE (FBPa)
4b: BETA-FRUCTOSE-1,6-DIPHOSPHATE (FBPb)
5a: MAGNESIUM ION (MGa)
5b: MAGNESIUM ION (MGb)
5c: MAGNESIUM ION (MGc)
5d: MAGNESIUM ION (MGd)
6a: SELENOMETHIONINE (MSEa)
6b: SELENOMETHIONINE (MSEb)
6c: SELENOMETHIONINE (MSEc)
6d: SELENOMETHIONINE (MSEd)
6e: SELENOMETHIONINE (MSEe)
6f: SELENOMETHIONINE (MSEf)
6g: SELENOMETHIONINE (MSEg)
6h: SELENOMETHIONINE (MSEh)
6i: SELENOMETHIONINE (MSEi)
6j: SELENOMETHIONINE (MSEj)
6k: SELENOMETHIONINE (MSEk)
6l: SELENOMETHIONINE (MSEl)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
AMP
2
Ligand/Ion
ADENOSINE MONOPHOSPHATE
2
BG6
1
Ligand/Ion
BETA-D-GLUCOSE-6-PHOSPHATE
3
CL
3
Ligand/Ion
CHLORIDE ION
4
FBP
2
Ligand/Ion
BETA-FRUCTOSE-1,6-DIPHOSPHATE
5
MG
4
Ligand/Ion
MAGNESIUM ION
6
MSE
12
Mod. Amino Acid
SELENOMETHIONINE
[
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:207 , TYR A:210 , ILE A:221 , LYS A:222 , GLN A:225 , HOH A:390 , HOH A:471 , HOH A:503 , HOH A:514 , GLU B:207 , TYR B:210 , ILE B:221 , LYS B:222 , GLN B:225 , HOH B:495
BINDING SITE FOR RESIDUE BG6 A 340
02
AC2
SOFTWARE
ARG A:238 , GLU B:89 , ASP B:110 , LEU B:112 , ASP B:113 , GLY B:114 , SER B:115 , ASN B:206 , TYR B:239 , GLY B:241 , LEU B:243 , TYR B:257 , TYR B:259 , LYS B:269 , GLU B:275 , MG B:345 , MG B:346 , HOH B:458 , HOH B:484 , HOH B:485 , HOH B:563 , HOH B:630 , HOH B:658
BINDING SITE FOR RESIDUE FBP B 342
03
AC3
SOFTWARE
GLU A:89 , ASP A:110 , LEU A:112 , ASP A:113 , GLY A:114 , SER A:115 , ASN A:206 , TYR A:239 , GLY A:241 , LEU A:243 , TYR A:257 , TYR A:259 , LYS A:269 , GLU A:275 , MG A:347 , MG A:348 , HOH A:385 , HOH A:451 , HOH A:527 , HOH A:552 , HOH A:583 , HOH A:660 , ARG B:238
BINDING SITE FOR RESIDUE FBP A 344
04
AC4
SOFTWARE
GLU B:89 , ASP B:110 , LEU B:112 , FBP B:342 , HOH B:490 , HOH B:657
BINDING SITE FOR RESIDUE MG B 345
05
AC5
SOFTWARE
ASP B:110 , ASP B:113 , GLU B:275 , FBP B:342
BINDING SITE FOR RESIDUE MG B 346
06
AC6
SOFTWARE
GLU A:89 , ASP A:110 , LEU A:112 , FBP A:344 , HOH A:659 , HOH A:660
BINDING SITE FOR RESIDUE MG A 347
07
AC7
SOFTWARE
ASP A:110 , ASP A:113 , GLU A:275 , FBP A:344
BINDING SITE FOR RESIDUE MG A 348
08
AC8
SOFTWARE
LYS B:30 , PHE B:187
BINDING SITE FOR RESIDUE CL B 349
09
AC9
SOFTWARE
GLY A:5 , LYS A:30 , VAL A:186 , PHE A:187
BINDING SITE FOR RESIDUE CL A 350
10
BC1
SOFTWARE
LYS A:30 , LYS B:30
BINDING SITE FOR RESIDUE CL A 351
11
BC2
SOFTWARE
ILE A:8 , LYS A:11 , GLN A:12 , PHE A:15 , ALA A:18 , THR A:19 , GLY A:20 , GLU A:21 , LEU A:22 , THR A:23 , LYS A:104 , TYR A:105 , ARG A:132 , HOH A:352 , HOH A:357 , HOH A:494 , HOH A:555 , HOH A:663
BINDING SITE FOR RESIDUE AMP A 341
12
BC3
SOFTWARE
VAL A:137 , ILE B:8 , LYS B:11 , GLN B:12 , PHE B:15 , ALA B:18 , THR B:19 , GLY B:20 , GLU B:21 , LEU B:22 , THR B:23 , LYS B:104 , TYR B:105 , ARG B:132 , HOH B:428 , HOH B:460 , HOH B:465 , HOH B:512 , HOH B:518 , HOH B:638
BINDING SITE FOR RESIDUE AMP B 343
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: FBPASE (A:268-280,B:268-280,A:268-280,B:26...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FBPASE
PS00124
Fructose-1-6-bisphosphatase active site.
F16PA_SHIBS
268-280
2
A:268-280
B:268-280
F16PA_ECOLI
268-280
2
A:268-280
B:268-280
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2q8ma_ (A:)
1b: SCOP_d2q8mb_ (B:)
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Protein Domains
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(
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Organisms
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)
(
)
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Carbohydrate phosphatase
(140)
Superfamily
:
Carbohydrate phosphatase
(140)
Family
:
Inositol monophosphatase/fructose-1,6-bisphosphatase-like
(121)
Protein domain
:
Fructose-1,6-bisphosphatase
(75)
Shigella boydii [TaxId: 621]
(1)
1a
d2q8ma_
A:
1b
d2q8mb_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2q8mA01 (A:2-193)
1b: CATH_2q8mB01 (B:2-193)
2a: CATH_2q8mA02 (A:195-332)
2b: CATH_2q8mB02 (B:195-332)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Fructose-1,6-Bisphosphatase; Chain A, domain 1
(114)
Homologous Superfamily
:
Fructose-1,6-Bisphosphatase, subunit A, domain 1
(114)
Shigella boydii. Organism_taxid: 621. Strain: xl1-blue.
(1)
1a
2q8mA01
A:2-193
1b
2q8mB01
B:2-193
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
D-Maltodextrin-Binding Protein; domain 2
(600)
Homologous Superfamily
:
[code=3.40.190.80, no name defined]
(109)
Shigella boydii. Organism_taxid: 621. Strain: xl1-blue.
(1)
2a
2q8mA02
A:195-332
2b
2q8mB02
B:195-332
[
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_FBPase_2q8mB01 (B:2-329)
1b: PFAM_FBPase_2q8mB02 (B:2-329)
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Clan
:
Phospoesterase
(42)
Family
:
FBPase
(32)
Escherichia coli (strain K12)
(3)
1a
FBPase-2q8mB01
B:2-329
1b
FBPase-2q8mB02
B:2-329
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Asymmetric Unit 1
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