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2Q7R
Biol. Unit 2
Info
Asym.Unit (157 KB)
Biol.Unit 1 (75 KB)
Biol.Unit 2 (75 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN FLAP WITH AN IODINATED ANALOG OF MK-591
Authors
:
A. D. Ferguson
Date
:
07 Jun 07 (Deposition) - 21 Aug 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
4.00
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Keywords
:
Flap, Mapeg, Membrane Protein, Lipid Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. D. Ferguson, B. M. Mckeever, S. Xu, D. Wisniewski, D. K. Miller, T. T. Yamin, R. H. Spencer, L. Chu, F. Ujjainwalla, B. R. Cunningham, J. F. Evans, J. W. Becker
Crystal Structure Of Inhibitor-Bound Human 5-Lipoxygenase-Activating Protein.
Science V. 317 510 2007
(for further references see the
PDB file header
)
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Hetero Components
(2, 12)
Info
All Hetero Components
1a: 3-[3-(3,3-DIMETHYLBUTANOYL)-1-(4-I... (3CSa)
1b: 3-[3-(3,3-DIMETHYLBUTANOYL)-1-(4-I... (3CSb)
1c: 3-[3-(3,3-DIMETHYLBUTANOYL)-1-(4-I... (3CSc)
1d: 3-[3-(3,3-DIMETHYLBUTANOYL)-1-(4-I... (3CSd)
1e: 3-[3-(3,3-DIMETHYLBUTANOYL)-1-(4-I... (3CSe)
1f: 3-[3-(3,3-DIMETHYLBUTANOYL)-1-(4-I... (3CSf)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
2k: SELENOMETHIONINE (MSEk)
2l: SELENOMETHIONINE (MSEl)
2m: SELENOMETHIONINE (MSEm)
2n: SELENOMETHIONINE (MSEn)
2o: SELENOMETHIONINE (MSEo)
2p: SELENOMETHIONINE (MSEp)
2q: SELENOMETHIONINE (MSEq)
2r: SELENOMETHIONINE (MSEr)
View:
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Label:
No.
Name
Count
Type
Full Name
1
3CS
3
Ligand/Ion
3-[3-(3,3-DIMETHYLBUTANOYL)-1-(4-IODOBENZYL)-5-(QUINOLIN-2-YLMETHOXY)-1H-INDOL-2-YL]-2,2-DIMETHYLPROPANOIC ACID
2
MSE
9
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(3, 3)
Info
All Sites
1: AC4 (SOFTWARE)
2: AC5 (SOFTWARE)
3: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC4
SOFTWARE
VAL D:21 , ASN D:23 , GLY D:24 , PHE D:25 , ALA D:27 , ASP F:62 , ALA F:63 , PHE F:114 , LYS F:116 , ILE F:119 , LEU F:120 , PHE F:123
BINDING SITE FOR RESIDUE 3CS F 504
2
AC5
SOFTWARE
ASP D:62 , ALA D:63 , THR D:66 , ILE D:113 , LYS D:116 , ILE D:119 , LEU D:120 , PHE D:123 , VAL E:21 , ASN E:23 , GLY E:24 , PHE E:25 , ALA E:27
BINDING SITE FOR RESIDUE 3CS D 505
3
AC6
SOFTWARE
ASP E:62 , TYR E:112 , LYS E:116 , ILE E:119 , LEU E:120 , PHE E:123 , VAL F:21 , ASN F:23 , GLY F:24 , PHE F:25 , ALA F:27 , HIS F:28
BINDING SITE FOR RESIDUE 3CS E 506
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: FLAP_GST2_LTC4S (D:46-60,E:46-60,F:46-60)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FLAP_GST2_LTC4S
PS01297
FLAP/GST2/LTC4S family signature.
AL5AP_HUMAN
46-60
3
-
-
-
D:46-60
E:46-60
F:46-60
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d2q7ra1 (A:1-139)
1b: SCOP_d2q7rb1 (B:1-139)
1c: SCOP_d2q7rc1 (C:1-139)
1d: SCOP_d2q7rd1 (D:1-139)
1e: SCOP_d2q7re1 (E:1-139)
1f: SCOP_d2q7rf1 (F:1-139)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
MAPEG domain-like
(9)
Superfamily
:
MAPEG domain-like
(9)
Family
:
MAPEG domain
(7)
Protein domain
:
Arachidonate 5-lipoxygenase-activating protein, FLAP
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d2q7ra1
A:1-139
1b
d2q7rb1
B:1-139
1c
d2q7rc1
C:1-139
1d
d2q7rd1
D:1-139
1e
d2q7re1
E:1-139
1f
d2q7rf1
F:1-139
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_2q7rB00 (B:2-148)
1b: CATH_2q7rD00 (D:2-148)
1c: CATH_2q7rC00 (C:2-149)
1d: CATH_2q7rF00 (F:2-149)
1e: CATH_2q7rA00 (A:2-140)
1f: CATH_2q7rE00 (E:2-140)
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Four Helix Bundle (Hemerythrin (Met), subunit A)
(300)
Homologous Superfamily
:
MAPEG domain-like
(7)
Human (Homo sapiens)
(6)
1a
2q7rB00
B:2-148
1b
2q7rD00
D:2-148
1c
2q7rC00
C:2-149
1d
2q7rF00
F:2-149
1e
2q7rA00
A:2-140
1f
2q7rE00
E:2-140
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Pfam Domains
(1, 6)
Info
all PFAM domains
1a: PFAM_MAPEG_2q7rF01 (F:5-136)
1b: PFAM_MAPEG_2q7rF02 (F:5-136)
1c: PFAM_MAPEG_2q7rF03 (F:5-136)
1d: PFAM_MAPEG_2q7rF04 (F:5-136)
1e: PFAM_MAPEG_2q7rF05 (F:5-136)
1f: PFAM_MAPEG_2q7rF06 (F:5-136)
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(
)
Clan
:
no clan defined [family: MAPEG]
(6)
Family
:
MAPEG
(6)
Homo sapiens (Human)
(6)
1a
MAPEG-2q7rF01
F:5-136
1b
MAPEG-2q7rF02
F:5-136
1c
MAPEG-2q7rF03
F:5-136
1d
MAPEG-2q7rF04
F:5-136
1e
MAPEG-2q7rF05
F:5-136
1f
MAPEG-2q7rF06
F:5-136
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Asymmetric Unit 1
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Asym.Unit (157 KB)
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