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2Q3G
Biol. Unit 1
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Asym.Unit (72 KB)
Biol.Unit 1 (35 KB)
Biol.Unit 2 (35 KB)
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(1)
Title
:
STRUCTURE OF THE PDZ DOMAIN OF HUMAN PDLIM7 BOUND TO A C-TERMINAL EXTENSION FROM HUMAN BETA-TROPOMYOSIN
Authors
:
C. Gileadi, E. Papagrigoriou, J. Elkins, N. Burgess-Brown, E. Salah, O. Gileadi, C. Umeano, G. Bunkoczi, F. Von Delft, J. Uppenberg, A. C. W. Pike, C. H. Arrowsmith, A. Edwards, J. Weigelt, M. Sundstrom, D. A. Doyle, Structural Genomics Consortium (Sgc)
Date
:
30 May 07 (Deposition) - 19 Jun 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.11
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Structural Genomics, Structural Genomics Consortium, Sgc
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Gileadi, E. Papagrigoriou, J. Elkins, N. Burgess-Brown, E. Salah, O. Gileadi, C. Umeano, G. Bunkoczi, F. Von Delft, J. Uppenberg, A. C. W. Pike, C. H. Arrowsmith, A. Edwards, J. Weigelt, M. Sundstrom, D. A. Doyle
Structure Of The Pdz Domain Of Human Pdlim7 Bound To A C-Terminal Extension From Human Beta-Tropomyosin
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
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No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
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Sites
(2, 2)
Info
All Sites
1: AC3 (SOFTWARE)
2: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
GLY A:43 , HOH A:3975 , HOH A:4058 , LYS B:69 , ALA B:72 , HOH B:2980 , HOH B:3079
BINDING SITE FOR RESIDUE EDO B 2960
2
AC4
SOFTWARE
LYS A:69 , ALA A:72 , HOH A:3978 , GLY B:43 , HOH B:2973 , HOH B:3064
BINDING SITE FOR RESIDUE EDO A 3960
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 1)
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1: PDZ (A:9-84)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
PDLI7_HUMAN
9-85
1
A:9-84
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2q3ga_ (A:)
1b: SCOP_d2q3gb_ (B:)
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Class
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All beta proteins
(24004)
Fold
:
PDZ domain-like
(299)
Superfamily
:
PDZ domain-like
(299)
Family
:
automated matches
(94)
Protein domain
:
automated matches
(94)
Human (Homo sapiens) [TaxId: 9606]
(71)
1a
d2q3ga_
A:
1b
d2q3gb_
B:
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CATH Domains
(1, 2)
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all CATH domains
1a: CATH_2q3gA00 (A:0-88)
1b: CATH_2q3gB00 (B:1-88)
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Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
Pdz3 Domain
(191)
Homologous Superfamily
:
[code=2.30.42.10, no name defined]
(191)
Human (Homo sapiens)
(120)
1a
2q3gA00
A:0-88
1b
2q3gB00
B:1-88
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_PDZ_2q3gB01 (B:3-82)
1b: PFAM_PDZ_2q3gB02 (B:3-82)
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Clan
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PDZ-like
(184)
Family
:
PDZ
(172)
Homo sapiens (Human)
(96)
1a
PDZ-2q3gB01
B:3-82
1b
PDZ-2q3gB02
B:3-82
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Asym.Unit (72 KB)
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