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2Q1N
Biol. Unit 1
Info
Asym.Unit (120 KB)
Biol.Unit 1 (113 KB)
Biol.Unit 2 (113 KB)
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(1)
Title
:
ACTIN DIMER CROSS-LINKED BETWEEN RESIDUES 41 AND 374
Authors
:
M. R. Sawaya, I. Pashkov, D. S. Kudryashov, H. Adisetiyo, E. Reisler, T.
Date
:
25 May 07 (Deposition) - 05 Jun 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (2x)
Biol. Unit 2: B (2x)
Keywords
:
Cross-Linked Dimer, Structural Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
M. R. Sawaya, D. S. Kudryashov, I. Pashkov, H. Adisetiyo, E. Reisler, T. O. Yeates
Multiple Crystal Structures Of Actin Dimers And Their Implications For Interactions In The Actin Filament.
Acta Crystallogr. , Sect. D V. 64 454 2008
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPa)
1b: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPb)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
3a: LATRUNCULIN A (LARa)
3b: LATRUNCULIN A (LARb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ANP
2
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2
CA
-1
Ligand/Ion
CALCIUM ION
3
LAR
2
Ligand/Ion
LATRUNCULIN A
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC5 (SOFTWARE)
4: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ANP A:400 , HOH A:408
BINDING SITE FOR RESIDUE CA A 401
2
AC2
SOFTWARE
GLN A:263 , SER A:265 , HOH A:410
BINDING SITE FOR RESIDUE CA A 402
3
AC5
SOFTWARE
GLY A:13 , SER A:14 , GLY A:15 , LEU A:16 , LYS A:18 , GLY A:156 , ASP A:157 , GLY A:158 , VAL A:159 , GLY A:182 , ARG A:210 , LYS A:213 , GLU A:214 , GLY A:301 , GLY A:302 , MET A:305 , TYR A:306 , CA A:401
BINDING SITE FOR RESIDUE ANP A 400
4
AC6
SOFTWARE
GLY A:15 , LEU A:16 , TYR A:69 , ASP A:157 , THR A:186 , ARG A:206 , GLU A:207 , ARG A:210
BINDING SITE FOR RESIDUE LAR A 403
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: ACTINS_ACT_LIKE (A:104-116)
2: ACTINS_2 (A:356-364)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ACTINS_ACT_LIKE
PS01132
Actins and actin-related proteins signature.
ACTS_RABIT
106-118
2
A:104-116
-
2
ACTINS_2
PS00432
Actins signature 2.
ACTS_RABIT
358-366
2
A:356-364
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2q1na1 (A:4-146)
1b: SCOP_d2q1nb1 (B:4-146)
1c: SCOP_d2q1nb2 (B:147-371)
1d: SCOP_d2q1na2 (A:147-372)
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Protein Domains
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Organisms
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)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
Actin-like ATPase domain
(426)
Family
:
Actin/HSP70
(199)
Protein domain
:
Actin
(69)
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
(55)
1a
d2q1na1
A:4-146
1b
d2q1nb1
B:4-146
1c
d2q1nb2
B:147-371
1d
d2q1na2
A:147-372
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CATH Domains
(2, 6)
Info
all CATH domains
1a: CATH_2q1nB01 (B:4-136,B:335-371)
1b: CATH_2q1nA01 (A:4-136,A:335-372)
1c: CATH_2q1nA02 (A:137-180,A:270-334)
1d: CATH_2q1nB02 (B:137-180,B:270-334)
2a: CATH_2q1nA03 (A:181-269)
2b: CATH_2q1nB03 (B:181-269)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Nucleotidyltransferase; domain 5
(788)
Homologous Superfamily
:
[code=3.30.420.40, no name defined]
(217)
Rabbit (Oryctolagus cuniculus)
(44)
1a
2q1nB01
B:4-136,B:335-371
1b
2q1nA01
A:4-136,A:335-372
1c
2q1nA02
A:137-180,A:270-334
1d
2q1nB02
B:137-180,B:270-334
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
Actin; Chain A, domain 4
(156)
Homologous Superfamily
:
Actin; Chain A, domain 4
(155)
Rabbit (Oryctolagus cuniculus)
(44)
2a
2q1nA03
A:181-269
2b
2q1nB03
B:181-269
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Actin_2q1nB01 (B:4-371)
1b: PFAM_Actin_2q1nB02 (B:4-371)
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Clan
:
Actin_ATPase
(173)
Family
:
Actin
(70)
Oryctolagus cuniculus (Rabbit)
(47)
1a
Actin-2q1nB01
B:4-371
1b
Actin-2q1nB02
B:4-371
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Asym.Unit (120 KB)
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