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2PRZ
Biol. Unit 2
Info
Asym.Unit (148 KB)
Biol.Unit 1 (74 KB)
Biol.Unit 2 (73 KB)
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(1)
Title
:
S. CEREVISIAE OROTATE PHOSPHORIBOSYLTRANSFERASE COMPLEXED WITH OMP
Authors
:
L. Gonzalez-Segura, T. D. Hurley, R. W. Mcclard
Date
:
04 May 07 (Deposition) - 15 Jan 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Alpha Beta, Oprtase-Omp Complex, Transferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
L. Gonzalez-Segura, J. F. Witte, R. W. Mcclard, T. D. Hurley
Ternary Complex Formation And Induced Asymmetry In Orotate Phosphoribosyltransferase.
Biochemistry V. 46 14075 2007
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
2a: OROTIDINE-5'-MONOPHOSPHATE (OMPa)
2b: OROTIDINE-5'-MONOPHOSPHATE (OMPb)
2c: OROTIDINE-5'-MONOPHOSPHATE (OMPc)
2d: OROTIDINE-5'-MONOPHOSPHATE (OMPd)
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Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
OMP
2
Ligand/Ion
OROTIDINE-5'-MONOPHOSPHATE
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Sites
(4, 4)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC7 (SOFTWARE)
4: AC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
TYR C:75 , LYS C:76
BINDING SITE FOR RESIDUE CL C 2
2
AC3
SOFTWARE
ARG C:105 , TYR D:75 , LYS D:76
BINDING SITE FOR RESIDUE CL D 225
3
AC7
SOFTWARE
LEU C:28 , LYS C:29 , PHE C:37 , PHE C:38 , ASP C:132 , VAL C:133 , MET C:134 , THR C:135 , ALA C:136 , GLY C:137 , THR C:138 , ALA C:139 , ARG C:163 , HOH C:652 , HOH C:654 , HOH C:671 , HOH C:698 , HOH C:718 , HOH C:728
BINDING SITE FOR RESIDUE OMP C 650
4
AC8
SOFTWARE
LEU D:28 , LYS D:29 , PHE D:37 , PHE D:38 , ASP D:132 , VAL D:133 , MET D:134 , THR D:135 , ALA D:136 , GLY D:137 , THR D:138 , ALA D:139 , ARG D:163 , HOH D:753 , HOH D:754 , HOH D:756 , HOH D:787 , HOH D:815 , HOH D:835
BINDING SITE FOR RESIDUE OMP D 750
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: PUR_PYR_PR_TRANSFER (C:127-139,D:127-139)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PUR_PYR_PR_TRANSFER
PS00103
Purine/pyrimidine phosphoribosyl transferases signature.
PYRE_YEAST
128-140
2
-
-
C:127-139
D:127-139
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Exons
(0, 0)
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2prza_ (A:)
1b: SCOP_d2przb_ (B:)
1c: SCOP_d2przc_ (C:)
1d: SCOP_d2przd_ (D:)
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Protein Domains
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(
)
Organisms
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)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PRTase-like
(145)
Superfamily
:
PRTase-like
(145)
Family
:
automated matches
(39)
Protein domain
:
automated matches
(39)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(3)
1a
d2prza_
A:
1b
d2przb_
B:
1c
d2przc_
C:
1d
d2przd_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2przA00 (A:4-224)
1b: CATH_2przC00 (C:4-224)
1c: CATH_2przB00 (B:2-224)
1d: CATH_2przD00 (D:2-224)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.2020, no name defined]
(117)
Baker's yeast (Saccharomyces cerevisiae)
(5)
1a
2przA00
A:4-224
1b
2przC00
C:4-224
1c
2przB00
B:2-224
1d
2przD00
D:2-224
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Pribosyltran_2przD01 (D:40-161)
1b: PFAM_Pribosyltran_2przD02 (D:40-161)
1c: PFAM_Pribosyltran_2przD03 (D:40-161)
1d: PFAM_Pribosyltran_2przD04 (D:40-161)
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Clan
:
PRTase-like
(59)
Family
:
Pribosyltran
(59)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(6)
1a
Pribosyltran-2przD01
D:40-161
1b
Pribosyltran-2przD02
D:40-161
1c
Pribosyltran-2przD03
D:40-161
1d
Pribosyltran-2przD04
D:40-161
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Asymmetric Unit 1
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Asym.Unit (148 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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