PLEASE WAIT...
Getting 'Biological Unit' information from database.
PLEASE WAIT...
Getting 'Hetero Component' information from database.
PLEASE WAIT...
Getting 'Site' information from database.
PLEASE WAIT...
Getting 'PROSITE' information from database.
PLEASE WAIT...
Getting 'Exon' information from database.
2PNO
Asym. Unit
Info
Asym.Unit (309 KB)
Biol.Unit 1 (79 KB)
Biol.Unit 2 (78 KB)
Biol.Unit 3 (74 KB)
Biol.Unit 4 (74 KB)
(using Jmol or JSmol)
spin
show selected part
auto zoom/center
Standard Views
(
Basic
|
Advanced
Interface
)
(
Basic
|
Advanced
Interface
)
Help
(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN LEUKOTRIENE C4 SYNTHASE
Authors
:
H. Ago, Y. Kanaoka, D. Irikura, B. K. Lam, T. Shimamura, K. F. Austen, M. M
Date
:
24 Apr 07 (Deposition) - 07 Aug 07 (Release) - 07 Dec 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.30
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Biol. Unit 3: G,H,I (1x)
Biol. Unit 4: J,K,L (1x)
Keywords
:
Membrane Protein, Helix Bundle, Homo Trimer, Mgst, Mapeg, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Ago, Y. Kanaoka, D. Irikura, B. K. Lam, T. Shimamura, K. F. Austen, M. Miyano
Crystal Structure Of A Human Membrane Protein Involved In Cysteinyl Leukotriene Biosynthesis
Nature V. 448 609 2007
[
close entry info
]
Hetero Components
(2, 69)
Info
All Hetero Components
1a: GLUTATHIONE (GSHa)
1b: GLUTATHIONE (GSHb)
1c: GLUTATHIONE (GSHc)
1d: GLUTATHIONE (GSHd)
1e: GLUTATHIONE (GSHe)
1f: GLUTATHIONE (GSHf)
1g: GLUTATHIONE (GSHg)
1h: GLUTATHIONE (GSHh)
1i: GLUTATHIONE (GSHi)
1j: GLUTATHIONE (GSHj)
1k: GLUTATHIONE (GSHk)
1l: GLUTATHIONE (GSHl)
2a: DODECYL-BETA-D-MALTOSIDE (LMTa)
2aa: DODECYL-BETA-D-MALTOSIDE (LMTaa)
2ab: DODECYL-BETA-D-MALTOSIDE (LMTab)
2ac: DODECYL-BETA-D-MALTOSIDE (LMTac)
2ad: DODECYL-BETA-D-MALTOSIDE (LMTad)
2ae: DODECYL-BETA-D-MALTOSIDE (LMTae)
2af: DODECYL-BETA-D-MALTOSIDE (LMTaf)
2ag: DODECYL-BETA-D-MALTOSIDE (LMTag)
2ah: DODECYL-BETA-D-MALTOSIDE (LMTah)
2ai: DODECYL-BETA-D-MALTOSIDE (LMTai)
2aj: DODECYL-BETA-D-MALTOSIDE (LMTaj)
2ak: DODECYL-BETA-D-MALTOSIDE (LMTak)
2al: DODECYL-BETA-D-MALTOSIDE (LMTal)
2am: DODECYL-BETA-D-MALTOSIDE (LMTam)
2an: DODECYL-BETA-D-MALTOSIDE (LMTan)
2ao: DODECYL-BETA-D-MALTOSIDE (LMTao)
2ap: DODECYL-BETA-D-MALTOSIDE (LMTap)
2aq: DODECYL-BETA-D-MALTOSIDE (LMTaq)
2ar: DODECYL-BETA-D-MALTOSIDE (LMTar)
2as: DODECYL-BETA-D-MALTOSIDE (LMTas)
2at: DODECYL-BETA-D-MALTOSIDE (LMTat)
2au: DODECYL-BETA-D-MALTOSIDE (LMTau)
2av: DODECYL-BETA-D-MALTOSIDE (LMTav)
2aw: DODECYL-BETA-D-MALTOSIDE (LMTaw)
2ax: DODECYL-BETA-D-MALTOSIDE (LMTax)
2ay: DODECYL-BETA-D-MALTOSIDE (LMTay)
2az: DODECYL-BETA-D-MALTOSIDE (LMTaz)
2b: DODECYL-BETA-D-MALTOSIDE (LMTb)
2ba: DODECYL-BETA-D-MALTOSIDE (LMTba)
2bb: DODECYL-BETA-D-MALTOSIDE (LMTbb)
2bc: DODECYL-BETA-D-MALTOSIDE (LMTbc)
2bd: DODECYL-BETA-D-MALTOSIDE (LMTbd)
2be: DODECYL-BETA-D-MALTOSIDE (LMTbe)
2c: DODECYL-BETA-D-MALTOSIDE (LMTc)
2d: DODECYL-BETA-D-MALTOSIDE (LMTd)
2e: DODECYL-BETA-D-MALTOSIDE (LMTe)
2f: DODECYL-BETA-D-MALTOSIDE (LMTf)
2g: DODECYL-BETA-D-MALTOSIDE (LMTg)
2h: DODECYL-BETA-D-MALTOSIDE (LMTh)
2i: DODECYL-BETA-D-MALTOSIDE (LMTi)
2j: DODECYL-BETA-D-MALTOSIDE (LMTj)
2k: DODECYL-BETA-D-MALTOSIDE (LMTk)
2l: DODECYL-BETA-D-MALTOSIDE (LMTl)
2m: DODECYL-BETA-D-MALTOSIDE (LMTm)
2n: DODECYL-BETA-D-MALTOSIDE (LMTn)
2o: DODECYL-BETA-D-MALTOSIDE (LMTo)
2p: DODECYL-BETA-D-MALTOSIDE (LMTp)
2q: DODECYL-BETA-D-MALTOSIDE (LMTq)
2r: DODECYL-BETA-D-MALTOSIDE (LMTr)
2s: DODECYL-BETA-D-MALTOSIDE (LMTs)
2t: DODECYL-BETA-D-MALTOSIDE (LMTt)
2u: DODECYL-BETA-D-MALTOSIDE (LMTu)
2v: DODECYL-BETA-D-MALTOSIDE (LMTv)
2w: DODECYL-BETA-D-MALTOSIDE (LMTw)
2x: DODECYL-BETA-D-MALTOSIDE (LMTx)
2y: DODECYL-BETA-D-MALTOSIDE (LMTy)
2z: DODECYL-BETA-D-MALTOSIDE (LMTz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GSH
12
Ligand/Ion
GLUTATHIONE
2
LMT
57
Ligand/Ion
DODECYL-BETA-D-MALTOSIDE
[
close Hetero Component info
]
Sites
(65, 65)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
65: HC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:51 , ASN A:55 , GLU A:58 , TYR A:59 , TYR A:93 , TYR A:97 , ARG A:104 , LEU A:108 , SER B:23 , VAL B:26 , ILE B:27 , ARG B:30 , PRO B:37 , TYR B:50 , GLN B:53
BINDING SITE FOR RESIDUE GSH A 201
02
AC2
SOFTWARE
ARG B:51 , ASN B:55 , GLU B:58 , TYR B:59 , TYR B:93 , TYR B:97 , ARG B:104 , LEU B:108 , SER C:23 , VAL C:26 , ILE C:27 , ARG C:30 , PRO C:37 , TYR C:50 , GLN C:53
BINDING SITE FOR RESIDUE GSH B 202
03
AC3
SOFTWARE
SER A:23 , VAL A:26 , ILE A:27 , ARG A:30 , PRO A:37 , TYR A:50 , GLN A:53 , ARG C:51 , ASN C:55 , GLU C:58 , TYR C:59 , TYR C:93 , TYR C:97 , ARG C:104 , LEU C:108 , LMT C:216
BINDING SITE FOR RESIDUE GSH C 203
04
AC4
SOFTWARE
ARG D:51 , ASN D:55 , GLU D:58 , TYR D:59 , TYR D:93 , TYR D:97 , ARG D:104 , LEU D:108 , SER E:23 , VAL E:26 , ILE E:27 , ARG E:30 , PRO E:37 , TYR E:50 , GLN E:53
BINDING SITE FOR RESIDUE GSH D 204
05
AC5
SOFTWARE
ARG E:51 , ASN E:55 , GLU E:58 , TYR E:59 , TYR E:93 , TYR E:97 , ARG E:104 , LEU E:108 , SER F:23 , VAL F:26 , ILE F:27 , ARG F:30 , PRO F:37 , TYR F:50 , GLN F:53
BINDING SITE FOR RESIDUE GSH E 205
06
AC6
SOFTWARE
SER D:23 , VAL D:26 , ILE D:27 , ARG D:30 , PRO D:37 , TYR D:50 , GLN D:53 , ARG F:51 , ASN F:55 , GLU F:58 , TYR F:59 , TYR F:93 , TYR F:97 , ARG F:104 , LEU F:108
BINDING SITE FOR RESIDUE GSH F 206
07
AC7
SOFTWARE
ARG G:51 , ASN G:55 , GLU G:58 , TYR G:59 , TYR G:93 , TYR G:97 , ARG G:104 , LEU G:108 , SER H:23 , ILE H:27 , ARG H:30 , PRO H:37 , TYR H:50 , GLN H:53
BINDING SITE FOR RESIDUE GSH G 207
08
AC8
SOFTWARE
ARG H:51 , ASN H:55 , GLU H:58 , TYR H:59 , TYR H:93 , TYR H:97 , ARG H:104 , LEU H:108 , SER I:23 , VAL I:26 , ILE I:27 , ARG I:30 , PRO I:37 , TYR I:50 , GLN I:53
BINDING SITE FOR RESIDUE GSH H 208
09
AC9
SOFTWARE
SER G:23 , VAL G:26 , ILE G:27 , ARG G:30 , TYR G:50 , GLN G:53 , ARG I:51 , ASN I:55 , GLU I:58 , TYR I:59 , TYR I:93 , TYR I:97 , ARG I:104 , LEU I:108
BINDING SITE FOR RESIDUE GSH I 209
10
BC1
SOFTWARE
ARG J:51 , ASN J:55 , GLU J:58 , TYR J:59 , TYR J:93 , TYR J:97 , ARG J:104 , LEU J:108 , SER K:23 , VAL K:26 , ILE K:27 , ARG K:30 , PRO K:37 , TYR K:50 , GLN K:53
BINDING SITE FOR RESIDUE GSH J 210
11
BC2
SOFTWARE
ARG K:51 , ASN K:55 , GLU K:58 , TYR K:59 , TYR K:93 , TYR K:97 , ARG K:104 , LEU K:108 , SER L:23 , VAL L:26 , ILE L:27 , ARG L:30 , PRO L:37 , TYR L:50 , GLN L:53
BINDING SITE FOR RESIDUE GSH K 211
12
BC3
SOFTWARE
SER J:23 , VAL J:26 , ILE J:27 , ARG J:30 , PRO J:37 , TYR J:50 , GLN J:53 , ARG L:51 , ASN L:55 , GLU L:58 , TYR L:59 , TYR L:93 , TYR L:97 , ARG L:104 , LEU L:108
BINDING SITE FOR RESIDUE GSH L 212
13
BC4
SOFTWARE
LMT B:218 , LEU C:24
BINDING SITE FOR RESIDUE LMT B 213
14
BC5
SOFTWARE
TYR C:21 , GLN C:95
BINDING SITE FOR RESIDUE LMT C 214
15
BC6
SOFTWARE
TYR A:21 , GLN A:25
BINDING SITE FOR RESIDUE LMT A 215
16
BC7
SOFTWARE
ALA A:20 , ILE A:27 , TYR C:59 , ARG C:104 , LEU C:105 , TYR C:109 , LEU C:115 , TRP C:116 , GSH C:203
BINDING SITE FOR RESIDUE LMT C 216
17
BC8
SOFTWARE
TYR A:59 , TRP A:116
BINDING SITE FOR RESIDUE LMT A 217
18
BC9
SOFTWARE
TYR B:59 , TYR B:109 , ARG B:113 , TRP B:116 , LMT B:213 , ALA C:20
BINDING SITE FOR RESIDUE LMT B 218
19
CC1
SOFTWARE
TYR F:59 , LEU F:108 , ALA F:112 , TRP F:116
BINDING SITE FOR RESIDUE LMT F 219
20
CC2
SOFTWARE
TYR D:59 , ALA D:112 , TRP D:116 , ALA E:20 , ILE E:27
BINDING SITE FOR RESIDUE LMT D 220
21
CC3
SOFTWARE
TYR E:59 , LEU E:115 , TRP E:116 , ALA F:20
BINDING SITE FOR RESIDUE LMT E 221
22
CC4
SOFTWARE
TYR G:59 , TYR G:109 , LEU G:115 , TRP G:116 , ALA H:20
BINDING SITE FOR RESIDUE LMT G 222
23
CC5
SOFTWARE
ILE J:27 , TYR L:59 , LEU L:115 , TRP L:116
BINDING SITE FOR RESIDUE LMT L 223
24
CC6
SOFTWARE
TYR K:59 , TRP K:116
BINDING SITE FOR RESIDUE LMT K 224
25
CC7
SOFTWARE
HIS K:129 , PHE K:130 , ASP L:3
BINDING SITE FOR RESIDUE LMT K 225
26
CC8
SOFTWARE
LEU L:81
BINDING SITE FOR RESIDUE LMT L 226
27
CC9
SOFTWARE
PHE B:130
BINDING SITE FOR RESIDUE LMT B 227
28
DC1
SOFTWARE
HIS A:75
BINDING SITE FOR RESIDUE LMT A 228
29
DC2
SOFTWARE
PHE D:130 , GLU E:76 , LMT E:231
BINDING SITE FOR RESIDUE LMT E 230
30
DC3
SOFTWARE
HIS E:75 , LMT E:230 , LMT E:269
BINDING SITE FOR RESIDUE LMT E 231
31
DC4
SOFTWARE
PHE E:130
BINDING SITE FOR RESIDUE LMT E 232
32
DC5
SOFTWARE
PHE F:130
BINDING SITE FOR RESIDUE LMT F 233
33
DC6
SOFTWARE
PHE G:73 , PHE G:74
BINDING SITE FOR RESIDUE LMT G 235
34
DC7
SOFTWARE
ALA B:128 , ARG B:136
BINDING SITE FOR RESIDUE LMT B 236
35
DC8
SOFTWARE
LYS A:2 , PHE C:73 , PHE C:74 , PRO D:132 , LMT D:238
BINDING SITE FOR RESIDUE LMT C 237
36
DC9
SOFTWARE
LMT C:237 , GLU D:4 , PHE D:73 , PHE D:74 , LYS E:2
BINDING SITE FOR RESIDUE LMT D 238
37
EC1
SOFTWARE
LYS J:2 , ASP J:3 , PHE L:73 , ALA L:128 , HIS L:129
BINDING SITE FOR RESIDUE LMT J 239
38
EC2
SOFTWARE
ARG I:136 , PHE K:74 , ALA K:128
BINDING SITE FOR RESIDUE LMT I 240
39
EC3
SOFTWARE
ALA F:128 , PRO F:132 , ALA F:133 , ARG F:136
BINDING SITE FOR RESIDUE LMT F 241
40
EC4
SOFTWARE
HIS B:75
BINDING SITE FOR RESIDUE LMT B 242
41
EC5
SOFTWARE
TRP D:116 , LEU E:24 , GLN E:25 , LMT E:268
BINDING SITE FOR RESIDUE LMT E 243
42
EC6
SOFTWARE
ILE A:72 , LMT A:245 , TRP B:68 , LMT C:246
BINDING SITE FOR RESIDUE LMT A 244
43
EC7
SOFTWARE
TRP A:68 , LMT A:244 , ILE C:72
BINDING SITE FOR RESIDUE LMT A 245
44
EC8
SOFTWARE
LMT A:244 , TRP B:68 , TRP C:68
BINDING SITE FOR RESIDUE LMT C 246
45
EC9
SOFTWARE
LYS D:2 , TRP D:68 , ILE F:72 , LMT F:248
BINDING SITE FOR RESIDUE LMT D 247
46
FC1
SOFTWARE
LMT D:247 , ILE E:72 , LMT E:249 , TRP F:68
BINDING SITE FOR RESIDUE LMT F 248
47
FC2
SOFTWARE
ILE D:72 , TRP E:68 , LMT F:248
BINDING SITE FOR RESIDUE LMT E 249
48
FC3
SOFTWARE
ILE G:72 , TRP H:68 , LMT I:252
BINDING SITE FOR RESIDUE LMT H 250
49
FC4
SOFTWARE
TRP G:68 , ILE I:72
BINDING SITE FOR RESIDUE LMT G 251
50
FC5
SOFTWARE
ALA H:65 , TRP H:68 , ILE H:72 , LMT H:250 , TRP I:68
BINDING SITE FOR RESIDUE LMT I 252
51
FC6
SOFTWARE
TRP J:68 , TRP K:68 , LMT L:254
BINDING SITE FOR RESIDUE LMT J 253
52
FC7
SOFTWARE
TRP J:68 , LMT J:253 , ILE L:72
BINDING SITE FOR RESIDUE LMT L 254
53
FC8
SOFTWARE
ILE K:72 , TRP L:68
BINDING SITE FOR RESIDUE LMT L 255
54
FC9
SOFTWARE
PRO A:132 , ARG A:136 , PHE E:74 , ALA E:128
BINDING SITE FOR RESIDUE LMT A 256
55
GC1
SOFTWARE
LEU I:18 , TYR I:21 , GLN I:95
BINDING SITE FOR RESIDUE LMT I 257
56
GC2
SOFTWARE
ALA I:128 , LEU K:135 , ARG K:136
BINDING SITE FOR RESIDUE LMT I 258
57
GC3
SOFTWARE
PHE C:130
BINDING SITE FOR RESIDUE LMT C 261
58
GC4
SOFTWARE
ARG A:92
BINDING SITE FOR RESIDUE LMT A 262
59
GC5
SOFTWARE
PHE A:73 , PRO E:132 , ARG E:136
BINDING SITE FOR RESIDUE LMT E 263
60
GC6
SOFTWARE
GLN G:95
BINDING SITE FOR RESIDUE LMT G 264
61
GC7
SOFTWARE
TYR L:21
BINDING SITE FOR RESIDUE LMT L 265
62
GC8
SOFTWARE
LMT E:269
BINDING SITE FOR RESIDUE LMT E 266
63
GC9
SOFTWARE
PHE G:130
BINDING SITE FOR RESIDUE LMT G 267
64
HC1
SOFTWARE
GLN E:95 , ARG E:99 , LMT E:243
BINDING SITE FOR RESIDUE LMT E 268
65
HC2
SOFTWARE
LMT E:231 , LMT E:266
BINDING SITE FOR RESIDUE LMT E 269
[
close Site info
]
SAPs(SNPs)/Variants
(1, 12)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_042736 (R142Q, chain A/B/C/D/E/F/G/H/I/J/K/L, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_042736
R
142
Q
LTC4S_HUMAN
Polymorphism
11541078
A/B/C/D/E/F/G/H/I/J/K/L
R
142
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 12)
Info
All PROSITE Patterns/Profiles
1: FLAP_GST2_LTC4S (A:42-56,B:42-56,C:42-56,D:42-56,E:...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FLAP_GST2_LTC4S
PS01297
FLAP/GST2/LTC4S family signature.
LTC4S_HUMAN
42-56
12
A:42-56
B:42-56
C:42-56
D:42-56
E:42-56
F:42-56
G:42-56
H:42-56
I:42-56
J:42-56
K:42-56
L:42-56
[
close PROSITE info
]
Exons
(5, 60)
Info
All Exons
Exon 1.1c (A:2-20 | B:2-20 | C:2-20 | D:2-20 ...)
Exon 1.3b (A:20-53 | B:20-53 | C:20-53 | D:20...)
Exon 1.3f (A:53-77 | B:53-77 | C:53-77 | D:53...)
Exon 1.3g (A:77-104 | B:77-104 | C:77-104 | D...)
Exon 1.4e (A:104-147 | B:104-147 | C:104-147 ...)
View:
Select:
Label:
All Exon Boundaries
1: Boundary -/1.1c
2: Boundary 1.1c/1.3b
3: Boundary 1.3b/1.3f
4: Boundary 1.3f/1.3g
5: Boundary 1.3g/1.4e
6: Boundary 1.4e/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1c
ENST00000292596
1c
ENSE00001194180
chr5:
179220987-179221139
153
LTC4S_HUMAN
1-20
20
12
A:2-20
B:2-20
C:2-20
D:2-20
E:2-20
F:2-20
G:2-20
H:2-20
I:2-20
J:2-20
K:2-20
L:2-20
19
19
19
19
19
19
19
19
19
19
19
19
1.3b
ENST00000292596
3b
ENSE00001056000
chr5:
179222585-179222684
100
LTC4S_HUMAN
20-53
34
12
A:20-53
B:20-53
C:20-53
D:20-53
E:20-53
F:20-53
G:20-53
H:20-53
I:20-53
J:20-53
K:20-53
L:20-53
34
34
34
34
34
34
34
34
34
34
34
34
1.3f
ENST00000292596
3f
ENSE00001255861
chr5:
179222787-179222857
71
LTC4S_HUMAN
53-77
25
12
A:53-77
B:53-77
C:53-77
D:53-77
E:53-77
F:53-77
G:53-77
H:53-77
I:53-77
J:53-77
K:53-77
L:53-77
25
25
25
25
25
25
25
25
25
25
25
25
1.3g
ENST00000292596
3g
ENSE00001056001
chr5:
179222942-179223023
82
LTC4S_HUMAN
77-104
28
12
A:77-104
B:77-104
C:77-104
D:77-104
E:77-104
F:77-104
G:77-104
H:77-104
I:77-104
J:77-104
K:77-104
L:77-104
28
28
28
28
28
28
28
28
28
28
28
28
1.4e
ENST00000292596
4e
ENSE00002050377
chr5:
179223254-179223513
260
LTC4S_HUMAN
104-150
47
12
A:104-147
B:104-147
C:104-147
D:104-147
E:104-147
F:104-147
G:104-147
H:104-147
I:104-147
J:104-147
K:104-147
L:104-147
44
44
44
44
44
44
44
44
44
44
44
44
[
close EXON info
]
SCOP Domains
(1, 12)
Info
All SCOP Domains
1a: SCOP_d2pnoa1 (A:2-147)
1b: SCOP_d2pnoh1 (H:2-147)
1c: SCOP_d2pnoi1 (I:2-147)
1d: SCOP_d2pnoj1 (J:2-147)
1e: SCOP_d2pnok1 (K:2-147)
1f: SCOP_d2pnol1 (L:2-147)
1g: SCOP_d2pnob1 (B:2-147)
1h: SCOP_d2pnoc1 (C:2-147)
1i: SCOP_d2pnod1 (D:2-147)
1j: SCOP_d2pnoe1 (E:2-147)
1k: SCOP_d2pnof1 (F:2-147)
1l: SCOP_d2pnog1 (G:2-147)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
MAPEG domain-like
(9)
Superfamily
:
MAPEG domain-like
(9)
Family
:
MAPEG domain
(7)
Protein domain
:
Leukotriene C4 synthase
(4)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d2pnoa1
A:2-147
1b
d2pnoh1
H:2-147
1c
d2pnoi1
I:2-147
1d
d2pnoj1
J:2-147
1e
d2pnok1
K:2-147
1f
d2pnol1
L:2-147
1g
d2pnob1
B:2-147
1h
d2pnoc1
C:2-147
1i
d2pnod1
D:2-147
1j
d2pnoe1
E:2-147
1k
d2pnof1
F:2-147
1l
d2pnog1
G:2-147
[
close SCOP info
]
CATH Domains
(1, 12)
Info
all CATH domains
1a: CATH_2pnoA00 (A:2-147)
1b: CATH_2pnoH00 (H:2-147)
1c: CATH_2pnoI00 (I:2-147)
1d: CATH_2pnoJ00 (J:2-147)
1e: CATH_2pnoK00 (K:2-147)
1f: CATH_2pnoL00 (L:2-147)
1g: CATH_2pnoB00 (B:2-147)
1h: CATH_2pnoC00 (C:2-147)
1i: CATH_2pnoD00 (D:2-147)
1j: CATH_2pnoE00 (E:2-147)
1k: CATH_2pnoF00 (F:2-147)
1l: CATH_2pnoG00 (G:2-147)
View:
Select:
Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
Four Helix Bundle (Hemerythrin (Met), subunit A)
(300)
Homologous Superfamily
:
MAPEG domain-like
(7)
Human (Homo sapiens)
(6)
1a
2pnoA00
A:2-147
1b
2pnoH00
H:2-147
1c
2pnoI00
I:2-147
1d
2pnoJ00
J:2-147
1e
2pnoK00
K:2-147
1f
2pnoL00
L:2-147
1g
2pnoB00
B:2-147
1h
2pnoC00
C:2-147
1i
2pnoD00
D:2-147
1j
2pnoE00
E:2-147
1k
2pnoF00
F:2-147
1l
2pnoG00
G:2-147
[
close CATH info
]
Pfam Domains
(1, 12)
Info
all PFAM domains
1a: PFAM_MAPEG_2pnoL01 (L:8-131)
1b: PFAM_MAPEG_2pnoL02 (L:8-131)
1c: PFAM_MAPEG_2pnoL03 (L:8-131)
1d: PFAM_MAPEG_2pnoL04 (L:8-131)
1e: PFAM_MAPEG_2pnoL05 (L:8-131)
1f: PFAM_MAPEG_2pnoL06 (L:8-131)
1g: PFAM_MAPEG_2pnoL07 (L:8-131)
1h: PFAM_MAPEG_2pnoL08 (L:8-131)
1i: PFAM_MAPEG_2pnoL09 (L:8-131)
1j: PFAM_MAPEG_2pnoL10 (L:8-131)
1k: PFAM_MAPEG_2pnoL11 (L:8-131)
1l: PFAM_MAPEG_2pnoL12 (L:8-131)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: MAPEG]
(6)
Family
:
MAPEG
(6)
Homo sapiens (Human)
(6)
1a
MAPEG-2pnoL01
L:8-131
1b
MAPEG-2pnoL02
L:8-131
1c
MAPEG-2pnoL03
L:8-131
1d
MAPEG-2pnoL04
L:8-131
1e
MAPEG-2pnoL05
L:8-131
1f
MAPEG-2pnoL06
L:8-131
1g
MAPEG-2pnoL07
L:8-131
1h
MAPEG-2pnoL08
L:8-131
1i
MAPEG-2pnoL09
L:8-131
1j
MAPEG-2pnoL10
L:8-131
1k
MAPEG-2pnoL11
L:8-131
1l
MAPEG-2pnoL12
L:8-131
[
close Pfam info
]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Chain B
Chain C
Chain D
Chain E
Chain F
Chain G
Chain H
Chain I
Chain J
Chain K
Chain L
Asymmetric Unit 1
Rendering
(selected part)
Molecule Coloring
(selected part)
by Chain (Asym. Unit)
by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
by SCOP Domain
by CATH Domain
by Pfam Domain
by Asymmetric Unit
by Exon
by Amino Acid
by Nucleotide
by Temperature
by Charge
by Rainbow (Group)
by Custom Color
Background Coloring
Choose
molecule
background
color...
[
close
]
RGB value
(e.g.: "#3cb371" or "60,179,113")
Stereo
Graphics Window
x
pixel
Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
[
close Script example commands
]
Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
QuickSearch:
by PDB,NDB,UniProt,PROSITE Code or
Search Term(s)
Show PDB file:
Asym.Unit (309 KB)
Header - Asym.Unit
Biol.Unit 1 (79 KB)
Header - Biol.Unit 1
Biol.Unit 2 (78 KB)
Header - Biol.Unit 2
Biol.Unit 3 (74 KB)
Header - Biol.Unit 3
Biol.Unit 4 (74 KB)
Header - Biol.Unit 4
Plain Text
HTML (compressed size)
use JSmol [Javascript]
use Jmol [Java applet]
Upload:
Select a local file
OR
Enter a remote file address
You can upload any molecular structure file format that is recognized by Jmol,
e.g.: PDB, mmCif, CIF, CML, MOL, XYZ
(also compressed with 'gzip', see the
Jmol documentation
for a complete list)
JenaLib Atlas Page
|
Sequence/Alignment View
2PNO
Jmol Script Commands
|
Jmol Color Schemes
|
Jmol Mouse Manual
|
Jmol Wiki
controls:
collapse
expand
Home
JenaLib
Jmol Scripting
Contact
Help