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2PLF
Asym. Unit
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Asym.Unit (72 KB)
Biol.Unit 1 (69 KB)
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(1)
Title
:
THE STRUCTURE OF AIF2GAMMA SUBUNIT FROM THE ARCHAEON SULFOLOBUS SOLFATARICUS IN THE NUCLEOTIDE-FREE FORM.
Authors
:
O. S. Nikonov, E. A. Stolboushkina, A. D. Nikulin, D. Hasenohrl, U. Blaesi, D. J. Manstein, R. V. Fedorov, M. B. Garber, S. V. Nikonov
Date
:
19 Apr 07 (Deposition) - 06 Nov 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Aif2, Initiation Factor 2 Gamma Subunit, Initiation Of The Translation, Nucleotide Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
O. Nikonov, E. Stolboushkina, A. Nikulin, D. Hasenohrl, U. Blasi, D. J. Manstein, R. Fedorov, M. Garber, S. Nikonov
New Insights Into The Interactions Of The Translation Initiation Factor 2 From Archaea With Guanine Nucleotides And Initiator Trna.
J. Mol. Biol. V. 373 328 2007
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(3, 3)
Info
All SCOP Domains
1a: SCOP_d2plfa2 (A:321-415)
2a: SCOP_d2plfa1 (A:207-320)
3a: SCOP_d2plfa3 (A:2-206)
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Protein Domains
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
Elongation factor/aminomethyltransferase common domain
(82)
Superfamily
:
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
(67)
Family
:
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
(48)
Protein domain
:
Initiation factor eIF2 gamma subunit
(16)
Sulfolobus solfataricus [TaxId: 2287]
(10)
1a
d2plfa2
A:321-415
Fold
:
Reductase/isomerase/elongation factor common domain
(381)
Superfamily
:
Translation proteins
(218)
Family
:
Elongation factors
(77)
Protein domain
:
Initiation factor eIF2 gamma subunit, domain II
(16)
Sulfolobus solfataricus [TaxId: 2287]
(10)
2a
d2plfa1
A:207-320
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
Initiation factor eIF2 gamma subunit, N-terminal (G) domain
(16)
Sulfolobus solfataricus [TaxId: 2287]
(10)
3a
d2plfa3
A:2-206
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CATH Domains
(2, 3)
Info
all CATH domains
1a: CATH_2plfA01 (A:2-207)
2a: CATH_2plfA02 (A:208-322)
2b: CATH_2plfA03 (A:323-415)
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Organisms
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(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Sulfolobus solfataricus. Organism_taxid: 2287.
(12)
1a
2plfA01
A:2-207
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Elongation Factor Tu (Ef-tu); domain 3
(323)
Homologous Superfamily
:
Translation factors
(223)
Sulfolobus solfataricus. Organism_taxid: 2287.
(3)
2a
2plfA02
A:208-322
2b
2plfA03
A:323-415
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Pfam Domains
(3, 3)
Info
all PFAM domains
1a: PFAM_GTP_EFTU_2plfA01 (A:7-204)
2a: PFAM_GTP_EFTU_D2_2plfA02 (A:235-308)
3a: PFAM_eIF2_C_2plfA03 (A:326-413)
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Clan
:
P-loop_NTPase
(1112)
Family
:
GTP_EFTU
(39)
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
(6)
1a
GTP_EFTU-2plfA01
A:7-204
Clan
:
no clan defined [family: GTP_EFTU_D2]
(39)
Family
:
GTP_EFTU_D2
(39)
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
(6)
2a
GTP_EFTU_D2-2plfA02
A:235-308
Clan
:
no clan defined [family: eIF2_C]
(10)
Family
:
eIF2_C
(10)
Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
(4)
3a
eIF2_C-2plfA03
A:326-413
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Asymmetric Unit 1
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