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2PIA
Asym. Unit
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Asym.Unit (60 KB)
Biol.Unit 1 (56 KB)
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(1)
Title
:
PHTHALATE DIOXYGENASE REDUCTASE: A MODULAR STRUCTURE FOR ELECTRON TRANSFER FROM PYRIDINE NUCLEOTIDES TO [2FE-2S]
Authors
:
C. C. Correll, C. J. Batie, D. P. Ballou, M. L. Ludwig
Date
:
15 Feb 93 (Deposition) - 15 Apr 93 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Reductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. C. Correll, C. J. Batie, D. P. Ballou, M. L. Ludwig
Phthalate Dioxygenase Reductase: A Modular Structure For Electron Transfer From Pyridine Nucleotides To [2Fe-2S].
Science V. 258 1604 1992
(for further references see the
PDB file header
)
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: FE2/S2 (INORGANIC) CLUSTER (FESa)
2a: FLAVIN MONONUCLEOTIDE (FMNa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
FES
1
Ligand/Ion
FE2/S2 (INORGANIC) CLUSTER
2
FMN
1
Ligand/Ion
FLAVIN MONONUCLEOTIDE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:44 , ARG A:55 , THR A:56 , TYR A:57 , SER A:58 , ALA A:72 , VAL A:73 , LYS A:74 , GLY A:79 , ARG A:80 , GLY A:82 , SER A:83 , ILE A:121 , THR A:124 , GLU A:223 , PHE A:225 , SER A:274 , HOH A:327 , HOH A:329 , HOH A:331 , HOH A:332 , HOH A:354 , HOH A:368
BINDING SITE FOR RESIDUE FMN A 322
2
AC2
SOFTWARE
SER A:271 , CYS A:272 , GLU A:273 , GLY A:275 , THR A:276 , CYS A:277 , GLY A:278 , CYS A:280 , MET A:306 , CYS A:308
BINDING SITE FOR RESIDUE FES A 323
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: FAD_FR (A:6-108)
2: 2FE2S_FER_2 (A:238-321)
3: 2FE2S_FER_1 (A:272-280)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FAD_FR
PS51384
Ferredoxin reductase-type FAD binding domain profile.
PDR_BURCE
7-109
1
A:6-108
2
2FE2S_FER_2
PS51085
2Fe-2S ferredoxin-type iron-sulfur binding domain profile.
PDR_BURCE
239-322
1
A:238-321
3
2FE2S_FER_1
PS00197
2Fe-2S ferredoxin-type iron-sulfur binding region signature.
PDR_BURCE
273-281
1
A:272-280
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(3, 3)
Info
All SCOP Domains
1a: SCOP_d2piaa1 (A:1-103)
2a: SCOP_d2piaa3 (A:224-321)
3a: SCOP_d2piaa2 (A:104-223)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Reductase/isomerase/elongation factor common domain
(381)
Superfamily
:
Riboflavin synthase domain-like
(130)
Family
:
Ferredoxin reductase FAD-binding domain-like
(72)
Protein domain
:
Phthalate dioxygenase reductase
(1)
Pseudomonas cepacia, db01 [TaxId: 292]
(1)
1a
d2piaa1
A:1-103
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-Grasp (ubiquitin-like)
(1032)
Superfamily
:
2Fe-2S ferredoxin-like
(174)
Family
:
2Fe-2S ferredoxin domains from multidomain proteins
(82)
Protein domain
:
Phthalate dioxygenase reductase, C-terminal domain
(1)
Pseudomonas cepacia, db01 [TaxId: 292]
(1)
2a
d2piaa3
A:224-321
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ferredoxin reductase-like, C-terminal NADP-linked domain
(120)
Superfamily
:
Ferredoxin reductase-like, C-terminal NADP-linked domain
(120)
Family
:
Aromatic dioxygenase reductase-like
(3)
Protein domain
:
Phthalate dioxygenase reductase
(1)
Pseudomonas cepacia, db01 [TaxId: 292]
(1)
3a
d2piaa2
A:104-223
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CATH Domains
(3, 3)
Info
all CATH domains
1a: CATH_2piaA02 (A:105-225)
2a: CATH_2piaA03 (A:226-321)
3a: CATH_2piaA01 (A:1-104)
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)
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)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module
(85)
Burkholderia cepacia. Organism_taxid: 292
(1)
1a
2piaA02
A:105-225
Architecture
:
Roll
(3276)
Topology
:
Ubiquitin-like (UB roll)
(674)
Homologous Superfamily
:
[code=3.10.20.30, no name defined]
(153)
Burkholderia cepacia. Organism_taxid: 292
(1)
2a
2piaA03
A:226-321
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Elongation Factor Tu (Ef-tu); domain 3
(323)
Homologous Superfamily
:
Translation factors
(223)
Burkholderia cepacia. Organism_taxid: 292
(1)
3a
2piaA01
A:1-104
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Pfam Domains
(3, 3)
Info
all PFAM domains
1a: PFAM_FAD_binding_6_2piaA01 (A:10-107)
2a: PFAM_Fer2_2piaA02 (A:240-313)
3a: PFAM_NAD_binding_1_2piaA03 (A:116-210)
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)
Clan
:
FAD_Lum_binding
(30)
Family
:
FAD_binding_6
(24)
Burkholderia cepacia (Pseudomonas cepacia)
(1)
1a
FAD_binding_6-2piaA01
A:10-107
Clan
:
Fer2
(69)
Family
:
Fer2
(60)
Burkholderia cepacia (Pseudomonas cepacia)
(1)
2a
Fer2-2piaA02
A:240-313
Clan
:
NAD_Ferredoxin
(30)
Family
:
NAD_binding_1
(30)
Burkholderia cepacia (Pseudomonas cepacia)
(1)
3a
NAD_binding_1-2piaA03
A:116-210
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Chain A
Asymmetric Unit 1
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