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2PBI
Asym. Unit
Info
Asym.Unit (539 KB)
Biol.Unit 1 (267 KB)
Biol.Unit 2 (272 KB)
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(1)
Title
:
THE MULTIFUNCTIONAL NATURE OF GBETA5/RGS9 REVEALED FROM ITS CRYSTAL STRUCTURE
Authors
:
M. L. Cheever, J. T. Snyder, S. Gershburg, D. P. Siderovski, T. K. Harden
Date
:
28 Mar 07 (Deposition) - 29 Jan 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Helix Wrap, Rgs Domain, Dep Domain, Dhex Domain, Ggl Domain, Beta Propeller, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. L. Cheever, J. T. Snyder, S. Gershburg, D. P. Siderovski, T. K. Harden, J. Sondek
Crystal Structure Of The Multifunctional Gbeta5-Rgs9 Complex.
Nat. Struct. Mol. Biol. V. 15 155 2008
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Hetero Components
(1, 9)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
1i: GLYCEROL (GOLi)
View:
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Label:
No.
Name
Count
Type
Full Name
1
GOL
9
Ligand/Ion
GLYCEROL
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:107 , PHE A:108 , ASP A:120 , TYR A:187 , HOH A:917 , HOH A:965
BINDING SITE FOR RESIDUE GOL A 904
2
AC2
SOFTWARE
ILE A:260 , MET A:261 , GLN B:50 , PHE B:51 , VAL B:52
BINDING SITE FOR RESIDUE GOL A 905
3
AC3
SOFTWARE
GLY A:263 , CYS A:264 , SER A:267 , ASN A:268 , ILE A:271 , HOH A:927 , HOH A:1008
BINDING SITE FOR RESIDUE GOL A 906
4
AC4
SOFTWARE
ALA B:158 , CYS B:200 , LEU B:201 , ARG B:246 , HOH B:910 , HOH B:913 , HOH B:940 , HOH B:943 , HOH B:955
BINDING SITE FOR RESIDUE GOL B 902
5
AC5
SOFTWARE
ASN A:299 , SER A:301 , ARG A:305 , HOH A:963 , GLU B:207 , PRO B:249 , SER B:250
BINDING SITE FOR RESIDUE GOL B 909
6
AC6
SOFTWARE
ARG C:235 , SER C:236 , THR C:237 , GLN D:233 , LEU D:268 , HOH D:1044
BINDING SITE FOR RESIDUE GOL C 907
7
AC7
SOFTWARE
ALA D:158 , CYS D:200 , LEU D:201 , ARG D:246 , HOH D:919 , HOH D:923 , HOH D:924 , HOH D:951 , HOH D:956
BINDING SITE FOR RESIDUE GOL D 901
8
AC8
SOFTWARE
SER C:301 , ARG C:305 , HOH C:924 , PRO D:205 , SER D:206 , GLU D:207 , PRO D:249 , SER D:250
BINDING SITE FOR RESIDUE GOL D 903
9
AC9
SOFTWARE
GLU D:27 , HIS D:34 , PHE D:235 , ASP D:271 , HOH D:989 , HOH D:1078 , HOH D:1109
BINDING SITE FOR RESIDUE GOL D 908
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(3, 10)
Info
All PROSITE Patterns/Profiles
1: DEP (A:30-105,C:30-105)
2: WD_REPEATS_1 (B:78-92,D:78-92|B:168-182,D:168-18...)
3: RGS (A:299-414,C:299-414)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DEP
PS50186
DEP domain profile.
RGS9_MOUSE
30-105
2
A:30-105
C:30-105
2
WD_REPEATS_1
PS00678
Trp-Asp (WD) repeats signature.
GNB5_MOUSE
120-134
210-224
340-354
6
B:78-92
D:78-92
B:168-182
D:168-182
B:298-312
D:298-312
3
RGS
PS50132
RGS domain profile.
RGS9_MOUSE
299-414
2
A:299-414
C:299-414
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2pbib_ (B:)
1b: SCOP_d2pbid_ (D:)
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
7-bladed beta-propeller
(245)
Superfamily
:
WD40 repeat-like
(95)
Family
:
automated matches
(36)
Protein domain
:
automated matches
(36)
Mouse (Mus musculus) [TaxId: 10090]
(1)
1a
d2pbib_
B:
1b
d2pbid_
D:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2pbiB00 (B:9-353)
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Classes
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)
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Topologies
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)
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)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
7 Propellor
(136)
Topology
:
Methylamine Dehydrogenase; Chain H
(136)
Homologous Superfamily
:
YVTN repeat-like/Quinoprotein amine dehydrogenase
(76)
House mouse (Mus musculus)
(2)
1a
2pbiB00
B:9-353
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Pfam Domains
(3, 6)
Info
all PFAM domains
1a: PFAM_RGS_2pbiC01 (C:299-413)
1b: PFAM_RGS_2pbiC02 (C:299-413)
2a: PFAM_DEP_2pbiC03 (C:33-103)
2b: PFAM_DEP_2pbiC04 (C:33-103)
3a: PFAM_G_gamma_2pbiC05 (C:211-280)
3b: PFAM_G_gamma_2pbiC06 (C:211-280)
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Clans
(
)
(
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Families
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(
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Organisms
(
)
(
)
Clan
:
RGS
(17)
Family
:
RGS
(16)
Mus musculus (Mouse)
(1)
1a
RGS-2pbiC01
C:299-413
1b
RGS-2pbiC02
C:299-413
Clan
:
no clan defined [family: DEP]
(7)
Family
:
DEP
(7)
Mus musculus (Mouse)
(5)
2a
DEP-2pbiC03
C:33-103
2b
DEP-2pbiC04
C:33-103
Clan
:
no clan defined [family: G-gamma]
(10)
Family
:
G-gamma
(10)
Mus musculus (Mouse)
(1)
3a
G-gamma-2pbiC05
C:211-280
3b
G-gamma-2pbiC06
C:211-280
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (539 KB)
Header - Asym.Unit
Biol.Unit 1 (267 KB)
Header - Biol.Unit 1
Biol.Unit 2 (272 KB)
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