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2P8V
Asym. Unit
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Asym.Unit (25 KB)
Biol.Unit 1 (22 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN HOMER3 EVH1 DOMAIN
Authors
:
S. Bouyain, J. Tu, G. N. Huang, P. F. Worley, D. Leahy
Date
:
23 Mar 07 (Deposition) - 20 Nov 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Homer3, Evh1 Domain, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. N. Huang, D. L. Huso, S. Bouyain, J. Tu, K. A. Mccorkell, M. J. May, Y. Zhu, M. Lutz, S. Collins, M. Dehoff, S. Kang, K. Whartenby, J. Powell, D. Leahy, P. F. Worley
Nfat Binding And Regulation Of T Cell Activation By The Cytoplasmic Scaffolding Homer Proteins.
Science V. 319 476 2008
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
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Label:
No.
Name
Count
Type
Full Name
1
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:68 , PRO A:69 , ASN A:70 , THR A:72 , ARG A:87 , ARG A:120
BINDING SITE FOR RESIDUE SO4 A 122
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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;
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End label:
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Exons
(4, 4)
Info
All Exons
Exon 1.2a (A:5-8)
Exon 1.3 (A:8-60)
Exon 1.4 (A:61-104)
Exon 1.5b (A:105-121)
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All Exon Boundaries
1: Boundary 1.1/1.2a
2: Boundary 1.2a/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5b
5: Boundary 1.5b/1.6
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000392351
1
ENSE00001511552
chr19:
19051983-19051860
124
HOME3_HUMAN
-
0
0
-
-
1.2a
ENST00000392351
2a
ENSE00001511549
chr19:
19049858-19049778
81
HOME3_HUMAN
1-5
5
1
A:5-8
4
1.3
ENST00000392351
3
ENSE00001182908
chr19:
19049693-19049537
157
HOME3_HUMAN
5-57
53
1
A:8-60
53
1.4
ENST00000392351
4
ENSE00001223641
chr19:
19049293-19049162
132
HOME3_HUMAN
58-101
44
1
A:61-104
44
1.5b
ENST00000392351
5b
ENSE00001122610
chr19:
19045219-19045112
108
HOME3_HUMAN
102-137
36
1
A:105-121
17
1.6
ENST00000392351
6
ENSE00000690660
chr19:
19043854-19043733
122
HOME3_HUMAN
138-178
41
0
-
-
1.7
ENST00000392351
7
ENSE00000690658
chr19:
19042941-19042785
157
HOME3_HUMAN
178-230
53
0
-
-
1.8
ENST00000392351
8
ENSE00000365684
chr19:
19042434-19042318
117
HOME3_HUMAN
231-269
39
0
-
-
1.9
ENST00000392351
9
ENSE00000365685
chr19:
19042220-19042134
87
HOME3_HUMAN
270-298
29
0
-
-
1.10a
ENST00000392351
10a
ENSE00001113523
chr19:
19040443-19040012
432
HOME3_HUMAN
299-361
63
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2p8va_ (A:)
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Protein Domains
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(
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Organisms
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(
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Class
:
All beta proteins
(24004)
Fold
:
PH domain-like barrel
(258)
Superfamily
:
PH domain-like
(257)
Family
:
Enabled/VASP homology 1 domain (EVH1 domain)
(14)
Protein domain
:
automated matches
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d2p8va_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2p8vA00 (A:5-121)
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Organisms
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)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
PH-domain like
(150)
Homologous Superfamily
:
Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)
(147)
Human (Homo sapiens)
(85)
1a
2p8vA00
A:5-121
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_WH1_2p8vA01 (A:5-113)
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Clan
:
PH
(111)
Family
:
WH1
(6)
Homo sapiens (Human)
(3)
1a
WH1-2p8vA01
A:5-113
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Asymmetric Unit 1
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