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2P2C
Biol. Unit 3
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Asym.Unit (400 KB)
Biol.Unit 1 (136 KB)
Biol.Unit 2 (135 KB)
Biol.Unit 3 (132 KB)
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(1)
Title
:
INHIBITION OF CASPASE-2 BY A DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN)
Authors
:
H Roschitzki Voser, C. Briand, G. Capitani, M. G. Gruetter
Date
:
07 Mar 07 (Deposition) - 22 May 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.24
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,P,Q,R,S,T,U
Biol. Unit 1: A,B,C,D,P,Q (1x)
Biol. Unit 2: E,F,G,H,R,S (1x)
Biol. Unit 3: I,J,K,L,T,U (1x)
Keywords
:
Apoptosis, Caspase, Caspase-2, Inhibition, Protein Design, Protein Libraries, Designed Ankyrin Repeat Proteins, Ribosome Display, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Schweizer, H. Roschitzki-Voser, P. Amstutz, C. Briand, M. Gulotti-Georgieva, E. Prenosil, H. K. Binz, G. Capitani, A. Baici, A. Pluckthun, M. G. Grutter
Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein: Specificity, Structure, And Inhibition Mechanism.
Structure V. 15 625 2007
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(2, 4)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_016335 (P13A, chain I/K, )
2: VAR_016336 (R294G, chain J/L, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
2
UniProt
VAR_016335
P
178
A
CASP2_HUMAN
Polymorphism
4647298
I/K
P
13
A
3
UniProt
VAR_016336
R
441
G
CASP2_HUMAN
Polymorphism
4647338
J/L
R
294
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(3, 6)
Info
All PROSITE Patterns/Profiles
1: CASPASE_P20 (I:33-159,K:33-159)
2: CASPASE_HIS (I:99-113,K:99-113)
3: CASPASE_CYS (I:146-157,K:146-157)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CASPASE_P20
PS50208
Caspase family p20 domain profile.
CASP2_HUMAN
198-324
2
-
-
-
-
I:33-159
K:33-159
2
CASPASE_HIS
PS01121
Caspase family histidine active site.
CASP2_HUMAN
264-278
2
-
-
-
-
I:99-113
K:99-113
3
CASPASE_CYS
PS01122
Caspase family cysteine active site.
CASP2_HUMAN
311-322
2
-
-
-
-
I:146-157
K:146-157
4
CASPASE_P10
PS50207
Caspase family p10 domain profile.
CASP2_HUMAN
354-447
0
-
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Exons
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SCOP Domains
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CATH Domains
(2, 8)
Info
all CATH domains
1a: CATH_2p2cC00 (C:8-168)
1b: CATH_2p2cE00 (E:8-167)
2a: CATH_2p2cP00 (P:9-166)
2b: CATH_2p2cQ00 (Q:12-169)
2c: CATH_2p2cR00 (R:9-165)
2d: CATH_2p2cU00 (U:13-166)
2e: CATH_2p2cS00 (S:13-165)
2f: CATH_2p2cT00 (T:15-166)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1460, no name defined]
(93)
Human (Homo sapiens)
(87)
1a
2p2cC00
C:8-168
1b
2p2cE00
E:8-167
Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
[code=1.25.40.20, no name defined]
(65)
Human (Homo sapiens)
(31)
2a
2p2cP00
P:9-166
2b
2p2cQ00
Q:12-169
2c
2p2cR00
R:9-165
2d
2p2cU00
U:13-166
2e
2p2cS00
S:13-165
2f
2p2cT00
T:15-166
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Pfam Domains
(1, 12)
Info
all PFAM domains
1a: PFAM_Peptidase_C14_2p2cL01 (L:211-298)
1b: PFAM_Peptidase_C14_2p2cL02 (L:211-298)
1c: PFAM_Peptidase_C14_2p2cL03 (L:211-298)
1d: PFAM_Peptidase_C14_2p2cL04 (L:211-298)
1e: PFAM_Peptidase_C14_2p2cL05 (L:211-298)
1f: PFAM_Peptidase_C14_2p2cL06 (L:211-298)
1g: PFAM_Peptidase_C14_2p2cL07 (L:211-298)
1h: PFAM_Peptidase_C14_2p2cL08 (L:211-298)
1i: PFAM_Peptidase_C14_2p2cL09 (L:211-298)
1j: PFAM_Peptidase_C14_2p2cL10 (L:211-298)
1k: PFAM_Peptidase_C14_2p2cL11 (L:211-298)
1l: PFAM_Peptidase_C14_2p2cL12 (L:211-298)
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Clan
:
Peptidase_CD
(53)
Family
:
Peptidase_C14
(53)
Homo sapiens (Human)
(51)
1a
Peptidase_C14-2p2cL01
L:211-298
1b
Peptidase_C14-2p2cL02
L:211-298
1c
Peptidase_C14-2p2cL03
L:211-298
1d
Peptidase_C14-2p2cL04
L:211-298
1e
Peptidase_C14-2p2cL05
L:211-298
1f
Peptidase_C14-2p2cL06
L:211-298
1g
Peptidase_C14-2p2cL07
L:211-298
1h
Peptidase_C14-2p2cL08
L:211-298
1i
Peptidase_C14-2p2cL09
L:211-298
1j
Peptidase_C14-2p2cL10
L:211-298
1k
Peptidase_C14-2p2cL11
L:211-298
1l
Peptidase_C14-2p2cL12
L:211-298
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Asym.Unit (400 KB)
Header - Asym.Unit
Biol.Unit 1 (136 KB)
Header - Biol.Unit 1
Biol.Unit 2 (135 KB)
Header - Biol.Unit 2
Biol.Unit 3 (132 KB)
Header - Biol.Unit 3
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