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2P1I
Asym. Unit
Info
Asym.Unit (347 KB)
Biol.Unit 1 (88 KB)
Biol.Unit 2 (86 KB)
Biol.Unit 3 (88 KB)
Biol.Unit 4 (87 KB)
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(1)
Title
:
PLASMODIUM YOELII RIBONUCLEOTIDE REDUCTASE SUBUNIT R2 (PY03671)
Authors
:
A. K. Wernimont, A. Dong, J. Choe, M. Gao, J. Walker, J. Lew, Z. Alam, Y. Zh P. Nordlund, C. H. Arrowsmith, A. M. Edwards, J. Weigelt, M. Sundstrom A. Bochkarev, R. Hui, J. D. Artz, Structural Genomics Consortium (
Date
:
05 Mar 07 (Deposition) - 27 Mar 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,D (1x)
Biol. Unit 2: B,C (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Ribonucleotide Reductase, F222 Twinning, Plasmodb Py03671, Structural Genomics Consortium, Sgc, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
A. K. Wernimont, A. Dong, J. Choe, M. Gao, J. Walker, J. Lew, Z. Alam, Y. Zhao, P. Nordlund, C. H. Arrowsmith, A. M. Edwards, J. Weigelt, M. Sundstrom, A. Bochkarev, R. Hui, J. D. Artz
Plasmodium Yoelii Ribonucleotide Reductase Subunit R2 (Py03671)
To Be Published
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Hetero Components
(1, 8)
Info
All Hetero Components
1a: FE (III) ION (FEa)
1b: FE (III) ION (FEb)
1c: FE (III) ION (FEc)
1d: FE (III) ION (FEd)
1e: FE (III) ION (FEe)
1f: FE (III) ION (FEf)
1g: FE (III) ION (FEg)
1h: FE (III) ION (FEh)
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No.
Name
Count
Type
Full Name
1
FE
8
Ligand/Ion
FE (III) ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:130 , GLU A:192 , GLU A:226 , HIS A:229
BINDING SITE FOR RESIDUE FE A 350
2
AC2
SOFTWARE
GLN B:126 , GLU B:130 , GLU B:192 , GLU B:226 , HIS B:229
BINDING SITE FOR RESIDUE FE B 350
3
AC3
SOFTWARE
GLU C:130 , GLU C:192 , GLU C:226 , HIS C:229
BINDING SITE FOR RESIDUE FE C 350
4
AC4
SOFTWARE
GLU D:130 , GLU D:192 , GLU D:226 , HIS D:229
BINDING SITE FOR RESIDUE FE D 350
5
AC5
SOFTWARE
GLN E:126 , GLU E:130 , GLU E:192 , GLU E:226 , HIS E:229
BINDING SITE FOR RESIDUE FE E 350
6
AC6
SOFTWARE
GLN F:126 , GLU F:130 , GLU F:192 , GLU F:226 , HIS F:229
BINDING SITE FOR RESIDUE FE F 350
7
AC7
SOFTWARE
GLU G:130 , GLU G:192 , GLU G:226 , HIS G:229
BINDING SITE FOR RESIDUE FE G 350
8
AC8
SOFTWARE
GLN H:126 , GLU H:130 , GLU H:192 , GLU H:226 , HIS H:229
BINDING SITE FOR RESIDUE FE H 350
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SAPs(SNPs)/Variants
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
(1, 8)
Info
all PFAM domains
1a: PFAM_Ribonuc_red_sm_2p1iH01 (H:47-309)
1b: PFAM_Ribonuc_red_sm_2p1iH02 (H:47-309)
1c: PFAM_Ribonuc_red_sm_2p1iH03 (H:47-309)
1d: PFAM_Ribonuc_red_sm_2p1iH04 (H:47-309)
1e: PFAM_Ribonuc_red_sm_2p1iH05 (H:47-309)
1f: PFAM_Ribonuc_red_sm_2p1iH06 (H:47-309)
1g: PFAM_Ribonuc_red_sm_2p1iH07 (H:47-309)
1h: PFAM_Ribonuc_red_sm_2p1iH08 (H:47-309)
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Clans
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Organisms
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)
(
)
Clan
:
Ferritin
(185)
Family
:
Ribonuc_red_sm
(41)
Plasmodium yoelii yoelii
(1)
1a
Ribonuc_red_sm-2p1iH01
H:47-309
1b
Ribonuc_red_sm-2p1iH02
H:47-309
1c
Ribonuc_red_sm-2p1iH03
H:47-309
1d
Ribonuc_red_sm-2p1iH04
H:47-309
1e
Ribonuc_red_sm-2p1iH05
H:47-309
1f
Ribonuc_red_sm-2p1iH06
H:47-309
1g
Ribonuc_red_sm-2p1iH07
H:47-309
1h
Ribonuc_red_sm-2p1iH08
H:47-309
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Show PDB file:
Asym.Unit (347 KB)
Header - Asym.Unit
Biol.Unit 1 (88 KB)
Header - Biol.Unit 1
Biol.Unit 2 (86 KB)
Header - Biol.Unit 2
Biol.Unit 3 (88 KB)
Header - Biol.Unit 3
Biol.Unit 4 (87 KB)
Header - Biol.Unit 4
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