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Biol. Unit 2
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Asym.Unit (48 KB)
Biol.Unit 1 (40 KB)
Biol.Unit 2 (116 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SCMH1
Authors
:
N. Herzanych, G. Senisterra, Y. Liu, L. Crombet, P. Loppnau, I. Koziera M. Vedadi, J. Weigelt, M. Sundstrom, C. H. Arrowsmith, A. M. Edwards, A. Bochkarev, J. Min, Structural Genomics Consortium (Sgc)
Date
:
28 Feb 07 (Deposition) - 27 Mar 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.75
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (3x)
Keywords
:
Scmh1, Structural Genomics, Structural Genomics Consortium, Sgc, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Herzanych, G. Senisterra, Y. Liu, L. Crombet, P. Loppnau, I. Kozieradzki, M. Vedadi, J. Weigelt, M. Sundstrom, C. H. Arrowsmith A. M. Edwards, A. Bochkarev, J. Min
Structure Of Scmh1
To Be Published
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
2a: PHOSPHATE ION (PO4a)
2b: PHOSPHATE ION (PO4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
PO4
6
Ligand/Ion
PHOSPHATE ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:115 , LYS A:118
BINDING SITE FOR RESIDUE CL A 301
2
AC2
SOFTWARE
ASN A:145 , HOH A:584
BINDING SITE FOR RESIDUE CL A 302
3
AC3
SOFTWARE
LYS A:142 , GLY A:194 , HOH A:445
BINDING SITE FOR RESIDUE CL A 303
4
AC4
SOFTWARE
PHE A:47 , PRO A:160 , HOH A:484 , HOH A:593
BINDING SITE FOR RESIDUE CL A 304
5
AC5
SOFTWARE
LYS A:63 , ASP A:93 , LYS A:168 , MET A:169 , PO4 A:401 , HOH A:557
BINDING SITE FOR RESIDUE CL A 305
6
AC6
SOFTWARE
MET A:138
BINDING SITE FOR RESIDUE CL A 306
7
AC7
SOFTWARE
ASP A:93 , GLY A:94 , ARG A:130 , PHE A:139 , GLU A:191 , VAL A:192 , CL A:305 , HOH A:560
BINDING SITE FOR RESIDUE PO4 A 401
8
AC8
SOFTWARE
MET A:149 , ALA A:150 , PRO A:151 , SER A:161 , ARG A:213 , ASP A:215 , HOH A:424 , HOH A:512 , HOH A:598
BINDING SITE FOR RESIDUE PO4 A 402
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 6)
Info
All PROSITE Patterns/Profiles
1: MBT (A:134-235)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MBT
PS51079
MBT repeat profile.
SCMH1_HUMAN
28-126
134-235
6
A:28-126
A:134-235
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2p0ka1 (A:27-133)
1b: SCOP_d2p0ka2 (A:134-235)
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Classes
(
)
(
)
Folds
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)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
SH3-like barrel
(1035)
Superfamily
:
Tudor/PWWP/MBT
(72)
Family
:
automated matches
(24)
Protein domain
:
automated matches
(24)
Human (Homo sapiens) [TaxId: 9606]
(20)
1a
d2p0ka1
A:27-133
1b
d2p0ka2
A:134-235
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2p0kA01 (A:27-53,A:158-235)
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Classes
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)
(
)
Architectures
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)
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)
Topologies
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)
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)
Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
SH3 type barrels.
(648)
Homologous Superfamily
:
[code=2.30.30.160, no name defined]
(35)
Human (Homo sapiens)
(27)
1a
2p0kA01
A:27-53,A:158-235
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_MBT_2p0kA01 (A:171-235)
1b: PFAM_MBT_2p0kA02 (A:171-235)
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Clans
(
)
(
)
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)
(
)
Organisms
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)
(
)
Clan
:
Tudor
(88)
Family
:
MBT
(24)
Homo sapiens (Human)
(20)
1a
MBT-2p0kA01
A:171-235
1b
MBT-2p0kA02
A:171-235
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Atom Selection
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Chain A
Asymmetric Unit 1
Asymmetric Unit 2
Asymmetric Unit 3
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Asym.Unit (48 KB)
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