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2OY3
Asym. Unit
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Asym.Unit (23 KB)
Biol.Unit 1 (19 KB)
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(1)
Title
:
CRYSTAL STRUCTURE ANALYSIS OF THE MONOMERIC SRCR DOMAIN OF MOUSE MARCO
Authors
:
J. R. M. Ojala, T. Pikkarainen, A. Tuuttila, T. Sandalova, K. Tryggvason
Date
:
21 Feb 07 (Deposition) - 17 Apr 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.78
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Extracellular Matrix, Scavenger Receptor Cysteine-Rich (Srcr), Macrophage Receptor, Ligand Binding Domain, Basic Cluster, Acidic Cluster, Ligand Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. R. Ojala, T. Pikkarainen, A. Tuuttila, T. Sandalova, K. Tryggvason
Crystal Structure Of The Cysteine-Rich Domain Of Scavenger Receptor Marco Reveals The Presence Of A Basic And An Acidic Cluster That Both Contribute To Ligand Recognition.
J. Biol. Chem. V. 282 16654 2007
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
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1a: MAGNESIUM ION (MGa)
1b: MAGNESIUM ION (MGb)
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No.
Name
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1
MG
2
Ligand/Ion
MAGNESIUM ION
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Sites
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:7 , HOH A:16 , HOH A:21 , HOH A:24 , HOH A:31 , ASP A:448
BINDING SITE FOR RESIDUE MG A 201
2
AC2
SOFTWARE
HOH A:15 , HOH A:53 , ASP A:449 , ASP A:451 , ASP A:454 , VAL A:485
BINDING SITE FOR RESIDUE MG A 202
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PROSITE Patterns/Profiles
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1: SRCR_2 (A:423-518)
2: SRCR_1 (A:426-463)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SRCR_2
PS50287
SRCR domain profile.
MARCO_MOUSE
423-518
1
A:423-518
2
SRCR_1
PS00420
SRCR domain signature.
MARCO_MOUSE
426-463
1
A:426-463
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Exons
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SCOP Domains
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CATH Domains
(1, 1)
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1a: CATH_2oy3A00 (A:421-518)
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Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Mac-2 Binding Protein
(7)
Homologous Superfamily
:
Mac-2 Binding Protein;
(7)
House mouse (Mus musculus)
(2)
1a
2oy3A00
A:421-518
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Pfam Domains
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1a: PFAM_SRCR_2oy3A01 (A:426-518)
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Clan
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no clan defined [family: SRCR]
(5)
Family
:
SRCR
(5)
Mus musculus (Mouse)
(2)
1a
SRCR-2oy3A01
A:426-518
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