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2OUA
Asym. Unit
Info
Asym.Unit (69 KB)
Biol.Unit 1 (34 KB)
Biol.Unit 2 (33 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF NOCARDIOPSIS PROTEASE (NAPASE)
Authors
:
B. A. Kelch, D. A. Agard
Date
:
09 Feb 07 (Deposition) - 20 Feb 07 (Release) - 06 Jun 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Serine Protease; Kinetic Stability; Acid Stability; Electrostatics, Hydrolase, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. A. Kelch, K. P. Eagen, F. P. Erciyas, E. L. Humphris, A. R. Thomason, S. Mitsuiki, D. A. Agard
Structural And Mechanistic Exploration Of Acid Resistance: Kinetic Stability Facilitates Evolution Of Extremophilic Behavior
J. Mol. Biol. V. 368 870 2007
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Hetero Components
(4, 10)
Info
All Hetero Components
1a: 4-(2-AMINOETHYL)BENZENESULFONYL FL... (AESa)
1b: 4-(2-AMINOETHYL)BENZENESULFONYL FL... (AESb)
2a: 1,4-DIETHYLENE DIOXIDE (DIOa)
2b: 1,4-DIETHYLENE DIOXIDE (DIOb)
2c: 1,4-DIETHYLENE DIOXIDE (DIOc)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
View:
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Label:
No.
Name
Count
Type
Full Name
1
AES
2
Ligand/Ion
4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE
2
DIO
3
Ligand/Ion
1,4-DIETHYLENE DIOXIDE
3
GOL
3
Ligand/Ion
GLYCEROL
4
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HOH A:9536 , HOH A:9577 , GLN B:62 , ARG B:85 , HOH B:9068
BINDING SITE FOR RESIDUE SO4 A 9400
02
AC2
SOFTWARE
PRO A:131 , ILE A:132 , ARG A:165 , HOH A:9419 , HOH A:9530 , HOH A:9596
BINDING SITE FOR RESIDUE SO4 A 9401
03
AC3
SOFTWARE
GLU A:191 , ASP A:194 , SER A:195 , THR A:213 , SER A:214 , GLY A:215 , GLY A:216 , HOH A:9430
BINDING SITE FOR RESIDUE AES A 9001
04
AC4
SOFTWARE
ALA B:190 , GLU B:191 , SER B:195 , THR B:213 , SER B:214 , GLY B:215 , GLY B:216 , HOH B:9036 , HOH B:9142
BINDING SITE FOR RESIDUE AES B 9002
05
AC5
SOFTWARE
ASN A:101 , ALA A:103 , SER A:237 , TRP A:238
BINDING SITE FOR RESIDUE DIO A 9003
06
AC6
SOFTWARE
LEU A:120A , ASN B:101 , PRO B:233 , MET B:234 , TRP B:238
BINDING SITE FOR RESIDUE DIO A 9004
07
AC7
SOFTWARE
CYS B:219A , ARG B:220 , THR B:222 , GLY B:223
BINDING SITE FOR RESIDUE DIO B 9005
08
AC8
SOFTWARE
ASN B:48A , ALA B:48B , GLU B:88A , ARG B:89 , TRP B:238 , HOH B:9084
BINDING SITE FOR RESIDUE GOL B 9006
09
AC9
SOFTWARE
LEU A:120A , TYR A:120J , HOH A:9477 , VAL B:59B , ARG B:89 , SER B:90 , TRP B:238 , HOH B:9033 , HOH B:9163
BINDING SITE FOR RESIDUE GOL A 9007
10
BC1
SOFTWARE
LEU A:114 , THR A:119 , ARG A:243 , THR A:244 , HOH A:9472 , HOH A:9525 , ASN B:236 , SER B:237 , ASN B:239
BINDING SITE FOR RESIDUE GOL A 9009
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2ouaa_ (A:)
1b: SCOP_d2ouab_ (B:)
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Protein Domains
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Organisms
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(
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Class
:
All beta proteins
(24004)
Fold
:
Trypsin-like serine proteases
(1752)
Superfamily
:
Trypsin-like serine proteases
(1752)
Family
:
automated matches
(71)
Protein domain
:
automated matches
(71)
Nocardiopsis alba [TaxId: 53437]
(1)
1a
d2ouaa_
A:
1b
d2ouab_
B:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2ouaA02 (A:120-230)
1b: CATH_2ouaB02 (B:120-230)
1c: CATH_2ouaA01 (A:15A-119,A:231-244)
1d: CATH_2ouaB01 (B:15A-119,B:231-244)
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(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Thrombin, subunit H
(1535)
Homologous Superfamily
:
Trypsin-like serine proteases
(1488)
Nocardiopsis alba. Organism_taxid: 53437. Strain: toa-1.
(1)
1a
2ouaA02
A:120-230
1b
2ouaB02
B:120-230
1c
2ouaA01
A:15A-119,A:231-244
1d
2ouaB01
B:15A-119,B:231-244
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (69 KB)
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