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2OMH
Biol. Unit 2
Info
Asym.Unit (36 KB)
Biol.Unit 1 (57 KB)
Biol.Unit 2 (57 KB)
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(1)
Title
:
STRUCTURE OF HUMAN INSULIN COCRYSTALLIZED WITH ARG-12 PEPTIDE IN PRESENCE OF UREA
Authors
:
M. Norrman, G. Schluckebier
Date
:
22 Jan 07 (Deposition) - 27 Mar 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.36
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (2x)
Biol. Unit 2: A,B,C,D,E,F (2x)
Keywords
:
Insulin Nph-Like Crystal, Hormone
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Norrman, F. Hubalek, G. Schluckebier
Structural Characterization Of Insulin Nph Formulations.
Eur. J. Pharm. Sci. V. 30 414 2007
[
close entry info
]
Hetero Components
(3, 18)
Info
All Hetero Components
1a: FORMAMIDE (ARFa)
1b: FORMAMIDE (ARFb)
2a: CHLORIDE ION (CLa)
3a: SODIUM ION (NAa)
4a: RESORCINOL (RCOa)
4b: RESORCINOL (RCOb)
4c: RESORCINOL (RCOc)
5a: UREA (UREa)
5b: UREA (UREb)
5c: UREA (UREc)
5d: UREA (UREd)
6a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ARF
4
Ligand/Ion
FORMAMIDE
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
NA
-1
Ligand/Ion
SODIUM ION
4
RCO
6
Ligand/Ion
RESORCINOL
5
URE
8
Ligand/Ion
UREA
6
ZN
-1
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS B:10 , CL B:301 , HIS D:10 , HIS F:10
BINDING SITE FOR RESIDUE ZN B 201
02
AC2
SOFTWARE
HIS B:10 , ZN B:201 , HOH B:319 , HIS D:10 , HIS F:10
BINDING SITE FOR RESIDUE CL B 301
03
AC3
SOFTWARE
ASN A:18 , CYS A:20 , HOH A:612 , HOH A:626 , HOH A:629 , HOH A:630
BINDING SITE FOR RESIDUE NA A 401
04
AC4
SOFTWARE
HIS B:5 , LEU D:17 , CYS E:6 , SER E:9 , ILE E:10 , CYS E:11 , HOH E:605 , LEU F:11 , ALA F:14 , HOH F:702
BINDING SITE FOR RESIDUE RCO E 501
05
AC5
SOFTWARE
CYS A:6 , SER A:9 , ILE A:10 , CYS A:11 , HOH A:602 , HOH A:613 , LEU B:11 , ALA B:14 , LEU B:17 , HIS D:5
BINDING SITE FOR RESIDUE RCO A 502
06
AC6
SOFTWARE
CYS C:6 , ILE C:10 , CYS C:11 , HOH C:605 , HOH C:619 , LEU D:11 , ALA D:14 , HIS F:5 , LEU F:17
BINDING SITE FOR RESIDUE RCO C 503
07
AC7
SOFTWARE
GLN A:5 , SER A:9 , ILE A:10 , CYS A:11 , GLN A:15
BINDING SITE FOR RESIDUE URE A 601
08
AC8
SOFTWARE
HIS F:5 , TYR F:16 , LEU F:17 , GLY F:20 , HOH F:706
BINDING SITE FOR RESIDUE URE F 602
09
AC9
SOFTWARE
GLN C:5 , SER C:9 , ILE C:10 , CYS C:11 , GLN C:15
BINDING SITE FOR RESIDUE URE C 603
10
BC1
SOFTWARE
PHE B:1 , GLN E:5 , SER E:9 , ILE E:10 , CYS E:11 , GLN E:15
BINDING SITE FOR RESIDUE URE E 604
11
BC2
SOFTWARE
HOH A:603 , SER C:9 , ILE C:10 , PHE F:1
BINDING SITE FOR RESIDUE ARF F 701
12
BC3
SOFTWARE
ASN A:21 , HOH A:623 , PHE D:1 , VAL D:2 , ASN D:3 , GLN D:4 , HOH D:707
BINDING SITE FOR RESIDUE ARF D 702
[
close Site info
]
SAPs(SNPs)/Variants
(18, 108)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_063736 (G1C, chain A/C/E, )
02: VAR_003976 (V3L, chain A/C/E, )
03: VAR_063724 (H5D, chain B/D/F, )
04: VAR_063737 (C7S, chain A/C/E, )
05: VAR_063738 (C7Y, chain A/C/E, )
06: VAR_063725 (G8R, chain B/D/F, )
07: VAR_063726 (G8S, chain B/D/F, )
08: VAR_003971 (H10D, chain B/D/F, )
09: VAR_063727 (L11P, chain B/D/F, )
10: VAR_063739 (S12C, chain A/C/E, )
11: VAR_063740 (Y14C, chain A/C/E, )
12: VAR_063741 (Y19C, chain A/C/E, )
13: VAR_063728 (C19G, chain B/D/F, )
14: VAR_063729 (R22Q, chain B/D/F, )
15: VAR_063730 (G23V, chain B/D/F, )
16: VAR_063731 (F24C, chain B/D/F, )
17: VAR_003972 (F24S, chain B/D/F, )
18: VAR_003973 (F25L, chain B/D/F, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_063736
G
90
C
INS_HUMAN
Disease (PNDM)
80356670
A/C/E
G
1
C
02
UniProt
VAR_003976
V
92
L
INS_HUMAN
Unclassified
---
A/C/E
V
3
L
03
UniProt
VAR_063724
H
29
D
INS_HUMAN
Disease (PNDM)
121908272
B/D/F
H
5
D
04
UniProt
VAR_063737
C
96
S
INS_HUMAN
Disease (PNDM)
80356671
A/C/E
C
7
S
05
UniProt
VAR_063738
C
96
Y
INS_HUMAN
Disease (PNDM)
80356671
A/C/E
C
7
Y
06
UniProt
VAR_063725
G
32
R
INS_HUMAN
Disease (PNDM)
80356664
B/D/F
G
8
R
07
UniProt
VAR_063726
G
32
S
INS_HUMAN
Disease (PNDM)
80356664
B/D/F
G
8
S
08
UniProt
VAR_003971
H
34
D
INS_HUMAN
Disease (HPRI)
---
B/D/F
H
10
D
09
UniProt
VAR_063727
L
35
P
INS_HUMAN
Disease (PNDM)
121908273
B/D/F
L
11
P
10
UniProt
VAR_063739
S
101
C
INS_HUMAN
Disease (PNDM)
121908276
A/C/E
S
12
C
11
UniProt
VAR_063740
Y
103
C
INS_HUMAN
Disease (PNDM)
121908277
A/C/E
Y
14
C
12
UniProt
VAR_063741
Y
108
C
INS_HUMAN
Disease (PNDM)
80356672
A/C/E
Y
19
C
13
UniProt
VAR_063728
C
43
G
INS_HUMAN
Disease (PNDM)
80356666
B/D/F
C
19
G
14
UniProt
VAR_063729
R
46
Q
INS_HUMAN
Disease (MODY10)
121908260
B/D/F
R
22
Q
15
UniProt
VAR_063730
G
47
V
INS_HUMAN
Disease (PNDM)
80356667
B/D/F
G
23
V
16
UniProt
VAR_063731
F
48
C
INS_HUMAN
Disease (PNDM)
80356668
B/D/F
F
24
C
17
UniProt
VAR_003972
F
48
S
INS_HUMAN
Unclassified
---
B/D/F
F
24
S
18
UniProt
VAR_003973
F
49
L
INS_HUMAN
Unclassified
---
B/D/F
F
25
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 6)
Info
All PROSITE Patterns/Profiles
1: INSULIN (A:6-20,C:6-20,E:6-20)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
INSULIN
PS00262
Insulin family signature.
INS_HUMAN
95-109
6
A:6-20
C:6-20
E:6-20
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Label:
Sorry, no Info available
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
[
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]
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