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2OJV
Asym. Unit
Info
Asym.Unit (117 KB)
Biol.Unit 1 (110 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A TERNARY COMPLEX OF GOAT LACTOPEROXIDASE WITH CYANIDE AND IODIDE IONS AT 2.4 A RESOLUTION
Authors
:
A. K. Singh, N. Singh, S. B. Singh, S. Sharma, P. Kaur, T. P. Singh
Date
:
15 Jan 07 (Deposition) - 30 Jan 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Cyanide, Complex, Heam, Metal Binding Protein, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. K. Singh, N. Singh, S. B. Singh, S. Sharma, P. Kaur, T. P. Singh
Crystal Structure Of A Ternary Complex Of Goat Lactoperoxidase With Cyanide And Iodide Ions At 2. 4 A Resolution
To Be Published
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Hetero Components
(7, 23)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: CARBONATE ION (CO3a)
3a: CYANIDE ION (CYNa)
4a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
5a: IODIDE ION (IODa)
5b: IODIDE ION (IODb)
5c: IODIDE ION (IODc)
5d: IODIDE ION (IODd)
5e: IODIDE ION (IODe)
5f: IODIDE ION (IODf)
5g: IODIDE ION (IODg)
5h: IODIDE ION (IODh)
6a: ALPHA-D-MANNOSE (MANa)
6b: ALPHA-D-MANNOSE (MANb)
6c: ALPHA-D-MANNOSE (MANc)
7a: N-ACETYL-D-GLUCOSAMINE (NAGa)
7b: N-ACETYL-D-GLUCOSAMINE (NAGb)
7c: N-ACETYL-D-GLUCOSAMINE (NAGc)
7d: N-ACETYL-D-GLUCOSAMINE (NAGd)
7e: N-ACETYL-D-GLUCOSAMINE (NAGe)
7f: N-ACETYL-D-GLUCOSAMINE (NAGf)
7g: N-ACETYL-D-GLUCOSAMINE (NAGg)
7h: N-ACETYL-D-GLUCOSAMINE (NAGh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
2
CO3
1
Ligand/Ion
CARBONATE ION
3
CYN
1
Ligand/Ion
CYANIDE ION
4
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
5
IOD
8
Ligand/Ion
IODIDE ION
6
MAN
3
Ligand/Ion
ALPHA-D-MANNOSE
7
NAG
8
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:95 , PRO A:209 , ILE A:315 , ARG A:504 , GLN A:568 , NAG A:597
BINDING SITE FOR RESIDUE NAG A 596
02
AC2
SOFTWARE
HIS A:565 , GLN A:568 , NAG A:596 , MAN A:598
BINDING SITE FOR RESIDUE NAG A 597
03
AC3
SOFTWARE
NAG A:597 , HOH A:3209 , HOH A:3232
BINDING SITE FOR RESIDUE MAN A 598
04
AC4
SOFTWARE
ASN A:205 , SER A:208 , ALA A:214 , VAL A:215 , GLN A:217 , NAG A:600 , HOH A:3224
BINDING SITE FOR RESIDUE NAG A 599
05
AC5
SOFTWARE
GLN A:217 , NAG A:599 , MAN A:601
BINDING SITE FOR RESIDUE NAG A 600
06
AC6
SOFTWARE
NAG A:600
BINDING SITE FOR RESIDUE MAN A 601
07
AC7
SOFTWARE
ASN A:241 , ALA A:244 , TRP A:384 , LYS A:388 , NAG A:603 , HOH A:3071
BINDING SITE FOR RESIDUE NAG A 602
08
AC8
SOFTWARE
NAG A:602 , MAN A:604 , HOH A:3100 , HOH A:3204
BINDING SITE FOR RESIDUE NAG A 603
09
AC9
SOFTWARE
NAG A:603
BINDING SITE FOR RESIDUE MAN A 604
10
BC1
SOFTWARE
ASN A:332 , NAG A:606
BINDING SITE FOR RESIDUE NAG A 605
11
BC2
SOFTWARE
NAG A:605
BINDING SITE FOR RESIDUE NAG A 606
12
BC3
SOFTWARE
ASP A:110 , THR A:184 , PHE A:186 , ASP A:188 , SER A:190
BINDING SITE FOR RESIDUE CA A 701
13
BC4
SOFTWARE
GLN A:105 , HIS A:109 , IOD A:2852 , HEM A:2853
BINDING SITE FOR RESIDUE CYN A 2844
14
BC5
SOFTWARE
ASN A:95 , ARG A:504 , ARG A:506
BINDING SITE FOR RESIDUE CO3 A 688
15
BC6
SOFTWARE
TRP A:46 , VAL A:342 , TRP A:452
BINDING SITE FOR RESIDUE IOD A 2845
16
BC7
SOFTWARE
SER A:198 , LYS A:465 , LYS A:474
BINDING SITE FOR RESIDUE IOD A 2846
17
BC8
SOFTWARE
PRO A:11 , LYS A:462 , THR A:463
BINDING SITE FOR RESIDUE IOD A 2847
18
BC9
SOFTWARE
ARG A:202 , LYS A:474
BINDING SITE FOR RESIDUE IOD A 2848
19
CC1
SOFTWARE
ASN A:80
BINDING SITE FOR RESIDUE IOD A 2849
20
CC2
SOFTWARE
GLU A:363 , ARG A:397 , THR A:560
BINDING SITE FOR RESIDUE IOD A 2850
21
CC3
SOFTWARE
ASN A:216 , GLN A:217 , PHE A:229
BINDING SITE FOR RESIDUE IOD A 2851
22
CC4
SOFTWARE
GLU A:258 , CYN A:2844 , HEM A:2853
BINDING SITE FOR RESIDUE IOD A 2852
23
CC5
SOFTWARE
MET A:101 , GLY A:104 , GLN A:105 , ASP A:108 , ASP A:112 , PHE A:113 , ALA A:114 , ARG A:255 , GLU A:258 , THR A:344 , PHE A:347 , ARG A:348 , GLY A:350 , HIS A:351 , VAL A:354 , ILE A:436 , ARG A:440 , CYN A:2844 , IOD A:2852 , HOH A:2908 , HOH A:2932 , HOH A:3227
BINDING SITE FOR RESIDUE HEM A 2853
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (117 KB)
Header - Asym.Unit
Biol.Unit 1 (110 KB)
Header - Biol.Unit 1
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