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2OIK
Biol. Unit 1
Info
Asym.Unit (110 KB)
Biol.Unit 1 (52 KB)
Biol.Unit 2 (52 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A HISTIDINE TRIAD (HIT) PROTEIN (MFLA_2506) FROM METHYLOBACILLUS FLAGELLATUS KT AT 1.65 A RESOLUTION
Authors
:
Joint Center For Structural Genomics (Jcsg)
Date
:
11 Jan 07 (Deposition) - 30 Jan 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.65
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Hit-Like Fold, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
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Reference
:
Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Histidine Triad (Hit) Protein (Yp_546612. 1) From Methylobacillus Flagellatus Kt At 1. 65 A Resolution
To Be Published
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Hetero Components
(2, 13)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
3o: SELENOMETHIONINE (MSEo)
3p: SELENOMETHIONINE (MSEp)
3q: SELENOMETHIONINE (MSEq)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
4c: ZINC ION (ZNc)
4d: ZINC ION (ZNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
GOL
5
Ligand/Ion
GLYCEROL
3
MSE
8
Mod. Amino Acid
SELENOMETHIONINE
4
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC5 (SOFTWARE)
04: AC9 (SOFTWARE)
05: BC1 (SOFTWARE)
06: BC2 (SOFTWARE)
07: BC3 (SOFTWARE)
08: BC5 (SOFTWARE)
09: BC7 (SOFTWARE)
10: BC8 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:11 , CYS A:14 , HIS A:49 , HIS A:95
BINDING SITE FOR RESIDUE ZN A 201
02
AC2
SOFTWARE
CYS B:11 , CYS B:14 , HIS B:49 , HIS B:95
BINDING SITE FOR RESIDUE ZN B 201
03
AC5
SOFTWARE
LEU A:89 , GLY A:90 , HIS A:97 , HIS A:99 , HOH A:212 , HOH A:241
BINDING SITE FOR RESIDUE CL A 202
04
AC9
SOFTWARE
LEU B:89 , GLY B:90 , HIS B:97 , HIS B:99 , GOL B:203 , HOH B:213 , HOH B:233
BINDING SITE FOR RESIDUE CL B 202
05
BC1
SOFTWARE
GLU A:12 , THR A:93 , HIS A:97 , HIS A:99 , HOH A:212 , HOH A:269
BINDING SITE FOR RESIDUE GOL A 203
06
BC2
SOFTWARE
GLU B:12 , ARG B:43 , THR B:93 , HIS B:97 , HIS B:99 , CL B:202 , HOH B:213 , HOH B:223 , HOH B:284
BINDING SITE FOR RESIDUE GOL B 203
07
BC3
SOFTWARE
ASN B:35 , VAL B:114 , HOH B:214 , HOH B:219 , ARG D:106
BINDING SITE FOR RESIDUE GOL B 204
08
BC5
SOFTWARE
ARG A:106 , ASN C:35 , ARG C:43 , HOH C:212 , HOH C:225 , HOH C:234
BINDING SITE FOR RESIDUE GOL C 204
09
BC7
SOFTWARE
ILE A:21 , HOH A:234
BINDING SITE FOR RESIDUE GOL A 204
10
BC8
SOFTWARE
ASN A:35 , ARG A:43 , VAL A:114 , HOH A:216 , HOH A:256 , HOH A:283
BINDING SITE FOR RESIDUE GOL A 205
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2oika1 (A:6-144)
1b: SCOP_d2oikb_ (B:)
1c: SCOP_d2oikc_ (C:)
1d: SCOP_d2oikd_ (D:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
HIT-like
(73)
Superfamily
:
HIT-like
(67)
Family
:
HIT (HINT, histidine triad) family of protein kinase-interacting proteins
(38)
Protein domain
:
Histidine triad protein Mfla2506
(1)
Methylobacillus flagellatus [TaxId: 405]
(1)
1a
d2oika1
A:6-144
1b
d2oikb_
B:
1c
d2oikc_
C:
1d
d2oikd_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2oikA00 (A:6-144)
1b: CATH_2oikB00 (B:6-144)
1c: CATH_2oikD00 (D:6-144)
1d: CATH_2oikC00 (C:6-145)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
HIT family, subunit A
(33)
Homologous Superfamily
:
HIT family, subunit A
(27)
Methylobacillus flagellatus kt. Organism_taxid: 265072. Strain: kt.
(1)
1a
2oikA00
A:6-144
1b
2oikB00
B:6-144
1c
2oikD00
D:6-144
1d
2oikC00
C:6-145
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_HIT_2oikD01 (D:15-106)
1b: PFAM_HIT_2oikD02 (D:15-106)
1c: PFAM_HIT_2oikD03 (D:15-106)
1d: PFAM_HIT_2oikD04 (D:15-106)
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Clan
:
HIT
(23)
Family
:
HIT
(19)
Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875)
(1)
1a
HIT-2oikD01
D:15-106
1b
HIT-2oikD02
D:15-106
1c
HIT-2oikD03
D:15-106
1d
HIT-2oikD04
D:15-106
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