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2ODT
Asym. Unit
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Asym.Unit (63 KB)
Biol.Unit 1 (59 KB)
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(1)
Title
:
STRUCTURE OF HUMAN INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE
Authors
:
R. D. Busam, C. Arrowsmith, H. Berglund, R. Collins, A. Edwards, U. B. Ericsson, S. Flodin, A. Flores, M. Hammarstrom, S. L. Holmberg, I. Johansson, T. Karlberg, T. Kotenyova, M. Moche, M. E. Nilsson, P. Nordlund, T. Nyman, D. Ogg, J. Sagemark, M. Sundstrom, J. Uppenberg S. Van Den Berg, J. Weigelt, C. Persson, A. G. Thorsell, B. M. Hallberg, Structural Genomics Consortium (Sgc)
Date
:
26 Dec 06 (Deposition) - 13 Feb 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.01
Chains
:
Asym. Unit : X
Biol. Unit 1: X (1x)
Keywords
:
Inositol, Kinase, Itpk1, Structural Genomics, Sgc- Karolinska Institute, Structural Genomics Consortium, Sgc, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. D. Busam, C. Arrowsmith, H. Berglund, R. Collins, A. Edwards, U. B. Ericsson, S. Flodin, A. Flores, M. Hammarstrom, S. L. Holmberg, I. Johansson, T. Karlberg, T. Kotenyova, M. Moche, M. E. Nilsson, P. Nordlund, T. Nyman, D. Ogg, J. Sagemark, M. Sundstrom, J. Uppenberg, S. Van Den Berg, J. Weigelt, C. Persson, A. G. Thorsell, B. M. Hallberg
Structure Of Human Inositol 1, 3, 4-Trisphosphate 5/6-Kinase
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 5)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
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No.
Name
Count
Type
Full Name
1
MSE
5
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(0, 0)
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;
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Exons
(10, 10)
Info
All Exons
Exon 1.2a (X:6-32)
Exon 1.3 (X:32-40)
Exon 1.4 (X:41-82)
Exon 1.5 (X:83-122)
Exon 1.6 (X:122-155)
Exon 1.7 (X:155-168)
Exon 1.8 (X:169-224)
Exon 1.9 (X:224-246 (gaps))
Exon 1.10 (X:247-301)
Exon 1.11b (X:301-322)
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01: Boundary 1.1/1.2a
02: Boundary 1.2a/1.3
03: Boundary 1.3/1.4
04: Boundary 1.4/1.5
05: Boundary 1.5/1.6
06: Boundary 1.6/1.7
07: Boundary 1.7/1.8
08: Boundary 1.8/1.9
09: Boundary 1.9/1.10
10: Boundary 1.10/1.11b
11: Boundary 1.11b/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000267615
1
ENSE00001376485
chr14:
93582263-93582117
147
ITPK1_HUMAN
-
0
0
-
-
1.2a
ENST00000267615
2a
ENSE00002191177
chr14:
93581650-93581414
237
ITPK1_HUMAN
1-32
32
1
X:6-32
27
1.3
ENST00000267615
3
ENSE00001755227
chr14:
93542964-93542940
25
ITPK1_HUMAN
32-40
9
1
X:32-40
9
1.4
ENST00000267615
4
ENSE00000808708
chr14:
93483146-93483021
126
ITPK1_HUMAN
41-82
42
1
X:41-82
42
1.5
ENST00000267615
5
ENSE00000659912
chr14:
93460342-93460225
118
ITPK1_HUMAN
83-122
40
1
X:83-122
40
1.6
ENST00000267615
6
ENSE00000808707
chr14:
93429194-93429096
99
ITPK1_HUMAN
122-155
34
1
X:122-155
34
1.7
ENST00000267615
7
ENSE00000659910
chr14:
93428740-93428700
41
ITPK1_HUMAN
155-168
14
1
X:155-168
14
1.8
ENST00000267615
8
ENSE00000659909
chr14:
93424711-93424546
166
ITPK1_HUMAN
169-224
56
1
X:169-224
56
1.9
ENST00000267615
9
ENSE00000659908
chr14:
93418358-93418291
68
ITPK1_HUMAN
224-246
23
1
X:224-246 (gaps)
23
1.10
ENST00000267615
10
ENSE00000659907
chr14:
93412838-93412676
163
ITPK1_HUMAN
247-301
55
1
X:247-301
55
1.11b
ENST00000267615
11b
ENSE00001627119
chr14:
93408249-93406069
2181
ITPK1_HUMAN
301-414
114
1
X:301-322
22
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SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Ins134_P3_kin_2odtX01 (X:6-318)
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Clans
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(
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)
(
)
Clan
:
ATP-grasp
(83)
Family
:
Ins134_P3_kin
(5)
Homo sapiens (Human)
(2)
1a
Ins134_P3_kin-2odtX01
X:6-318
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Asymmetric Unit 1
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