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2O8F
Asym. Unit
Info
Asym.Unit (299 KB)
Biol.Unit 1 (288 KB)
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(1)
Title
:
HUMAN MUTSALPHA (MSH2/MSH6) BOUND TO DNA WITH A SINGLE BASE T INSERT
Authors
:
J. J. Warren, T. J. Pohlhaus, A. Changela, P. L. Modrich, L. S. Beese
Date
:
12 Dec 06 (Deposition) - 05 Jun 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.25
Chains
:
Asym. Unit : A,B,E,F
Biol. Unit 1: A,B,E,F (1x)
Keywords
:
Dna Mismatch Repair, Dna Damage Response, Somatic Hypermutation, Protein-Dna Complex, Dna Mispair, Cancer, Abc Transporter Atpase, Dna Binding Protein-Dna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. J. Warren, T. J. Pohlhaus, A. Changela, R. R. Iyer, P. L. Modrich, L. S. Beese
Structure Of The Human Mutsalpha Dna Lesion Recognition Complex.
Mol. Cell V. 26 579 2007
[
close entry info
]
Hetero Components
(2, 2)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
2a: MAGNESIUM ION (MGa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADP
1
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
MG
1
Ligand/Ion
MAGNESIUM ION
[
close Hetero Component info
]
Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:676 , ADP A:936
BINDING SITE FOR RESIDUE MG A 935
2
AC2
SOFTWARE
ILE A:648 , PHE A:650 , ILE A:651 , PRO A:670 , ASN A:671 , MET A:672 , GLY A:673 , GLY A:674 , LYS A:675 , SER A:676 , THR A:677 , TYR A:815 , MG A:935
BINDING SITE FOR RESIDUE ADP A 936
[
close Site info
]
SAPs(SNPs)/Variants
(166, 166)
Info
(mutated residues are not available)
All SNPs/Variants
001: VAR_054511 (A2T, chain A, )
002: VAR_013171 (T8M, chain A, )
003: VAR_043736 (S13I, chain A, )
004: VAR_043737 (V17F, chain A, )
005: VAR_043738 (T33P, chain A, )
006: VAR_043739 (G40S, chain A, )
007: VAR_019233 (Y43C, chain A, )
008: VAR_043740 (T44M, chain A, )
009: VAR_043741 (A45V, chain A, )
010: VAR_004470 (H46Q, chain A, )
011: VAR_043743 (L93F, chain A, )
012: VAR_004471 (R96H, chain A, )
013: VAR_043744 (Y98C, chain A, )
014: VAR_043745 (V102I, chain A, )
015: VAR_038026 (R106K, chain A, )
016: VAR_019234 (N127S, chain A, )
017: VAR_004472 (N139S, chain A, )
018: VAR_004473 (I145M, chain A, )
019: VAR_012936 (V161D, chain A, )
020: VAR_054512 (G162A, chain A, )
021: VAR_043747 (G162R, chain A, )
022: VAR_043748 (V163D, chain A, )
023: VAR_022670 (V163G, chain A, )
024: VAR_043749 (G164R, chain A, )
025: VAR_067284 (Y165D, chain A, )
026: VAR_004474 (D167H, chain A, )
027: VAR_043750 (I169V, chain A, )
028: VAR_043751 (L173P, chain A, )
029: VAR_043752 (L175P, chain A, )
030: VAR_067285 (E177H, chain A, )
031: VAR_043753 (L187P, chain A, )
032: VAR_054513 (E198G, chain A, )
033: VAR_012937 (C199R, chain A, )
034: VAR_043754 (G203R, chain A, )
035: VAR_068705 (E205Q, chain A, )
036: VAR_012938 (I216V, chain A, )
037: VAR_043755 (K246Q, chain A, )
038: VAR_043756 (A272V, chain A, )
039: VAR_043757 (D283Y, chain A, )
040: VAR_004476 (A305T, chain A, )
041: VAR_004477 (G322D, chain A, )
042: VAR_012939 (S323C, chain A, )
043: VAR_043758 (S323Y, chain A, )
044: VAR_068706 (A328P, chain A, )
045: VAR_054514 (N331D, chain A, )
046: VAR_043759 (C333Y, chain A, )
047: VAR_043760 (T335I, chain A, )
048: VAR_043761 (P336S, chain A, )
049: VAR_043762 (V342I, chain A, )
050: VAR_043763 (P349L, chain A, )
051: VAR_043764 (R359S, chain A, )
052: VAR_068707 (V367I, chain A, )
053: VAR_067286 (P385L, chain A, )
054: VAR_004478 (L390F, chain A, )
055: VAR_043765 (K393M, chain A, )
056: VAR_012958 (L396V, chain B, )
057: VAR_012940 (Q419K, chain A, )
058: VAR_068710 (L435P, chain B, )
059: VAR_043949 (L449P, chain B, )
060: VAR_038035 (R468H, chain B, )
061: VAR_054515 (V470E, chain A, )
062: VAR_068708 (D487E, chain A, )
063: VAR_042275 (M492V, chain B, )
064: VAR_043767 (M492V, chain A, )
065: VAR_038036 (S503C, chain B, )
066: VAR_012941 (D506Y, chain A, )
067: VAR_043950 (V509A, chain B, )
068: VAR_067287 (F519L, chain A, )
069: VAR_043951 (Q522R, chain B, )
070: VAR_004479 (R524P, chain A, )
071: VAR_038037 (Y538S, chain B, )
072: VAR_043768 (T552P, chain A, )
073: VAR_012942 (S554R, chain A, )
074: VAR_004480 (E562V, chain A, )
075: VAR_043769 (T564A, chain A, )
076: VAR_012959 (G566R, chain B, )
077: VAR_038038 (S580L, chain B, )
078: VAR_043770 (N583S, chain A, )
079: VAR_068711 (L585P, chain B, )
080: VAR_012943 (N596S, chain A, )
081: VAR_043771 (A600V, chain A, )
082: VAR_043772 (D603N, chain A, )
083: VAR_054516 (H610N, chain A, )
084: VAR_067296 (K610N, chain B, )
085: VAR_043773 (Y619C, chain A, )
086: VAR_043952 (E619D, chain B, )
087: VAR_004482 (P622L, chain A, )
088: VAR_029244 (P623A, chain B, )
089: VAR_043953 (P623L, chain B, )
090: VAR_043774 (Q629R, chain A, )
091: VAR_012944 (A636P, chain A, )
092: VAR_054517 (R638G, chain A, )
093: VAR_043775 (H639R, chain A, )
094: VAR_004483 (H639Y, chain A, )
095: VAR_004484 (C641G, chain A, )
096: VAR_054518 (Q645E, chain A, )
097: VAR_043776 (E647K, chain A, )
098: VAR_043777 (Y656H, chain A, )
099: VAR_022671 (D660G, chain A, )
100: VAR_067761 (G669R, chain A, )
101: VAR_038027 (P670L, chain A, )
102: VAR_043778 (N671Y, chain A, )
103: VAR_067288 (G674R, chain A, )
104: VAR_004485 (G674S, chain A, )
105: VAR_067289 (K675A, chain A, )
106: VAR_068712 (S677T, chain B, )
107: VAR_043779 (I679T, chain A, )
108: VAR_043954 (G685A, chain B, )
109: VAR_012945 (M688I, chain A, )
110: VAR_009250 (G692R, chain A, )
111: VAR_054519 (P696L, chain A, )
112: VAR_004486 (C697F, chain A, )
113: VAR_009251 (C697R, chain A, )
114: VAR_012960 (Q698E, chain B, )
115: VAR_043781 (S723F, chain A, )
116: VAR_043956 (K728T, chain B, )
117: VAR_043782 (M729V, chain A, )
118: VAR_043783 (T732I, chain A, )
119: VAR_054520 (D748Y, chain A, )
120: VAR_043785 (E749K, chain A, )
121: VAR_067290 (G759E, chain A, )
122: VAR_004487 (I770V, chain A, )
123: VAR_043957 (R772Q, chain B, )
124: VAR_043958 (R772W, chain B, )
125: VAR_038028 (M779I, chain A, )
126: VAR_043959 (A787V, chain B, )
127: VAR_043960 (V800A, chain B, )
128: VAR_012961 (V800L, chain B, )
129: VAR_012962 (D803G, chain B, )
130: VAR_067291 (L805V, chain A, )
131: VAR_038029 (T807S, chain A, )
132: VAR_043786 (M813V, chain A, )
133: VAR_043787 (Q824E, chain A, )
134: VAR_004488 (A834T, chain A, )
135: VAR_038030 (N835H, chain A, )
136: VAR_054521 (H839Q, chain A, )
137: VAR_043788 (H839R, chain A, )
138: VAR_067292 (C843G, chain A, )
139: VAR_013172 (K845E, chain A, )
140: VAR_012963 (Y850C, chain B, )
141: VAR_043789 (E853A, chain A, )
142: VAR_043961 (K854M, chain B, )
143: VAR_012964 (V878A, chain B, )
144: VAR_014902 (I886V, chain B, )
145: VAR_043962 (R901H, chain B, )
146: VAR_012965 (R976H, chain B, )
147: VAR_043963 (A1021D, chain B, )
148: VAR_067297 (D1026Y, chain B, )
149: VAR_043964 (D1031V, chain B, )
150: VAR_043965 (R1076C, chain B, )
151: VAR_067298 (P1087S, chain B, )
152: VAR_012966 (P1087T, chain B, )
153: VAR_043966 (R1095H, chain B, )
154: VAR_043967 (T1100M, chain B, )
155: VAR_043968 (C1158R, chain B, )
156: VAR_043969 (E1163V, chain B, )
157: VAR_043970 (E1193K, chain B, )
158: VAR_004491 (D1213V, chain B, )
159: VAR_043971 (T1219I, chain B, )
160: VAR_067299 (T1225M, chain B, )
161: VAR_038039 (V1232L, chain B, )
162: VAR_038040 (E1234Q, chain B, )
163: VAR_043972 (H1248D, chain B, )
164: VAR_004492 (V1260I, chain B, )
165: VAR_043973 (T1284M, chain B, )
166: VAR_038041 (R1321G, chain B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
001
UniProt
VAR_054511
A
2
T
MSH2_HUMAN
Disease (HNPCC1)
---
A
A
2
T
002
UniProt
VAR_013171
T
8
M
MSH2_HUMAN
Polymorphism
17217716
A
T
8
M
003
UniProt
VAR_043736
S
13
I
MSH2_HUMAN
Unclassified
---
A
S
13
I
004
UniProt
VAR_043737
V
17
F
MSH2_HUMAN
Unclassified
---
A
V
17
F
005
UniProt
VAR_043738
T
33
P
MSH2_HUMAN
Disease (HNPCC1)
---
A
T
33
P
006
UniProt
VAR_043739
G
40
S
MSH2_HUMAN
Unclassified
---
A
G
40
S
007
UniProt
VAR_019233
Y
43
C
MSH2_HUMAN
Polymorphism
17217723
A
Y
43
C
008
UniProt
VAR_043740
T
44
M
MSH2_HUMAN
Disease (HNPCC1)
---
A
T
44
M
009
UniProt
VAR_043741
A
45
V
MSH2_HUMAN
Disease (HNPCC1)
---
A
A
45
V
010
UniProt
VAR_004470
H
46
Q
MSH2_HUMAN
Disease (HNPCC1)
33946261
A
H
46
Q
011
UniProt
VAR_043743
L
93
F
MSH2_HUMAN
Disease (HNPCC1)
---
A
L
93
F
012
UniProt
VAR_004471
R
96
H
MSH2_HUMAN
Polymorphism
---
A
R
96
H
013
UniProt
VAR_043744
Y
98
C
MSH2_HUMAN
Unclassified
---
A
Y
98
C
014
UniProt
VAR_043745
V
102
I
MSH2_HUMAN
Disease (HNPCC1)
---
A
V
102
I
015
UniProt
VAR_038026
R
106
K
MSH2_HUMAN
Polymorphism
41295286
A
R
106
K
016
UniProt
VAR_019234
N
127
S
MSH2_HUMAN
Disease (HNPCC1)
17217772
A
N
127
S
017
UniProt
VAR_004472
N
139
S
MSH2_HUMAN
Disease (HNPCC1)
---
A
N
139
S
018
UniProt
VAR_004473
I
145
M
MSH2_HUMAN
Disease (HNPCC1)
63750124
A
I
145
M
019
UniProt
VAR_012936
V
161
D
MSH2_HUMAN
Disease (HNPCC1)
---
A
V
161
D
020
UniProt
VAR_054512
G
162
A
MSH2_HUMAN
Disease (HNPCC1)
---
A
G
162
A
021
UniProt
VAR_043747
G
162
R
MSH2_HUMAN
Disease (HNPCC1)
---
A
G
162
R
022
UniProt
VAR_043748
V
163
D
MSH2_HUMAN
Disease (HNPCC1)
---
A
V
163
D
023
UniProt
VAR_022670
V
163
G
MSH2_HUMAN
Disease (HNPCC1)
---
A
V
163
G
024
UniProt
VAR_043749
G
164
R
MSH2_HUMAN
Disease (HNPCC1)
---
A
G
164
R
025
UniProt
VAR_067284
Y
165
D
MSH2_HUMAN
Unclassified
---
A
Y
165
D
026
UniProt
VAR_004474
D
167
H
MSH2_HUMAN
Disease (HNPCC1)
---
A
D
167
H
027
UniProt
VAR_043750
I
169
V
MSH2_HUMAN
Unclassified
63750716
A
I
169
V
028
UniProt
VAR_043751
L
173
P
MSH2_HUMAN
Disease (HNPCC1)
---
A
L
173
P
029
UniProt
VAR_043752
L
175
P
MSH2_HUMAN
Disease (HNPCC1)
---
A
L
175
P
030
UniProt
VAR_067285
E
177
H
MSH2_HUMAN
Unclassified
---
A
E
177
H
031
UniProt
VAR_043753
L
187
P
MSH2_HUMAN
Disease (HNPCC1)
---
A
L
187
P
032
UniProt
VAR_054513
E
198
G
MSH2_HUMAN
Disease (HNPCC1)
---
A
E
198
G
033
UniProt
VAR_012937
C
199
R
MSH2_HUMAN
Unclassified
---
A
C
199
R
034
UniProt
VAR_043754
G
203
R
MSH2_HUMAN
Unclassified
---
A
G
203
R
035
UniProt
VAR_068705
E
205
Q
MSH2_HUMAN
Unclassified
---
A
E
205
Q
036
UniProt
VAR_012938
I
216
V
MSH2_HUMAN
Unclassified
---
A
I
216
V
037
UniProt
VAR_043755
K
246
Q
MSH2_HUMAN
Unclassified
---
A
K
246
Q
038
UniProt
VAR_043756
A
272
V
MSH2_HUMAN
Unclassified
34136999
A
A
272
V
039
UniProt
VAR_043757
D
283
Y
MSH2_HUMAN
Disease (HNPCC1)
---
A
D
283
Y
040
UniProt
VAR_004476
A
305
T
MSH2_HUMAN
Disease (HNPCC1)
---
A
A
305
T
041
UniProt
VAR_004477
G
322
D
MSH2_HUMAN
Polymorphism
4987188
A
G
322
D
042
UniProt
VAR_012939
S
323
C
MSH2_HUMAN
Unclassified
---
A
S
323
C
043
UniProt
VAR_043758
S
323
Y
MSH2_HUMAN
Unclassified
---
A
S
323
Y
044
UniProt
VAR_068706
A
328
P
MSH2_HUMAN
Unclassified
---
A
A
328
P
045
UniProt
VAR_054514
N
331
D
MSH2_HUMAN
Unclassified
---
A
N
331
D
046
UniProt
VAR_043759
C
333
Y
MSH2_HUMAN
Disease (HNPCC1)
---
A
C
333
Y
047
UniProt
VAR_043760
T
335
I
MSH2_HUMAN
Unclassified
---
A
T
335
I
048
UniProt
VAR_043761
P
336
S
MSH2_HUMAN
Disease (HNPCC1)
---
A
P
336
S
049
UniProt
VAR_043762
V
342
I
MSH2_HUMAN
Unclassified
---
A
V
342
I
050
UniProt
VAR_043763
P
349
L
MSH2_HUMAN
Disease (HNPCC1)
---
A
P
349
L
051
UniProt
VAR_043764
R
359
S
MSH2_HUMAN
Disease (HNPCC1)
---
A
R
359
S
052
UniProt
VAR_068707
V
367
I
MSH2_HUMAN
Unclassified
---
A
V
367
I
053
UniProt
VAR_067286
P
385
L
MSH2_HUMAN
Unclassified
---
A
P
385
L
054
UniProt
VAR_004478
L
390
F
MSH2_HUMAN
Unclassified
17224367
A
L
390
F
055
UniProt
VAR_043765
K
393
M
MSH2_HUMAN
Disease (HNPCC1)
---
A
K
393
M
056
UniProt
VAR_012958
L
396
V
MSH6_HUMAN
Unclassified
2020908
B
L
396
V
057
UniProt
VAR_012940
Q
419
K
MSH2_HUMAN
Unclassified
63750006
A
Q
419
K
058
UniProt
VAR_068710
L
435
P
MSH6_HUMAN
Unclassified
---
B
L
435
P
059
UniProt
VAR_043949
L
449
P
MSH6_HUMAN
Unclassified
---
B
L
449
P
060
UniProt
VAR_038035
R
468
H
MSH6_HUMAN
Polymorphism
41295268
B
R
468
H
061
UniProt
VAR_054515
V
470
E
MSH2_HUMAN
Unclassified
---
A
V
470
E
062
UniProt
VAR_068708
D
487
E
MSH2_HUMAN
Unclassified
---
A
D
487
E
063
UniProt
VAR_042275
M
492
V
MSH6_HUMAN
Unclassified
---
B
M
492
V
064
UniProt
VAR_043767
M
492
V
MSH2_HUMAN
Disease (HNPCC1)
---
A
M
492
V
065
UniProt
VAR_038036
S
503
C
MSH6_HUMAN
Unclassified
---
B
S
503
C
066
UniProt
VAR_012941
D
506
Y
MSH2_HUMAN
Unclassified
---
A
D
506
Y
067
UniProt
VAR_043950
V
509
A
MSH6_HUMAN
Polymorphism
---
B
V
509
A
068
UniProt
VAR_067287
F
519
L
MSH2_HUMAN
Unclassified
---
A
F
519
L
069
UniProt
VAR_043951
Q
522
R
MSH6_HUMAN
Unclassified
---
B
Q
522
R
070
UniProt
VAR_004479
R
524
P
MSH2_HUMAN
Disease (HNPCC1)
---
A
R
524
P
071
UniProt
VAR_038037
Y
538
S
MSH6_HUMAN
Polymorphism
728619
B
Y
538
S
072
UniProt
VAR_043768
T
552
P
MSH2_HUMAN
Disease (HNPCC1)
---
A
T
552
P
073
UniProt
VAR_012942
S
554
R
MSH2_HUMAN
Unclassified
---
A
S
554
R
074
UniProt
VAR_004480
E
562
V
MSH2_HUMAN
Disease (HNPCC1)
---
A
E
562
V
075
UniProt
VAR_043769
T
564
A
MSH2_HUMAN
Unclassified
55778204
A
T
564
A
076
UniProt
VAR_012959
G
566
R
MSH6_HUMAN
Unclassified
---
B
G
566
R
077
UniProt
VAR_038038
S
580
L
MSH6_HUMAN
Polymorphism
41295270
B
S
580
L
078
UniProt
VAR_043770
N
583
S
MSH2_HUMAN
Disease (HNPCC1)
---
A
N
583
S
079
UniProt
VAR_068711
L
585
P
MSH6_HUMAN
Unclassified
---
B
L
585
P
080
UniProt
VAR_012943
N
596
S
MSH2_HUMAN
Unclassified
41295288
A
N
596
S
081
UniProt
VAR_043771
A
600
V
MSH2_HUMAN
Disease (HNPCC1)
---
A
A
600
V
082
UniProt
VAR_043772
D
603
N
MSH2_HUMAN
Disease (HNPCC1)
---
A
D
603
N
083
UniProt
VAR_054516
H
610
N
MSH2_HUMAN
Unclassified
---
A
H
610
N
084
UniProt
VAR_067296
K
610
N
MSH6_HUMAN
Unclassified
---
B
K
610
N
085
UniProt
VAR_043773
Y
619
C
MSH2_HUMAN
Unclassified
---
A
Y
619
C
086
UniProt
VAR_043952
E
619
D
MSH6_HUMAN
Unclassified
---
B
E
619
D
087
UniProt
VAR_004482
P
622
L
MSH2_HUMAN
Disease (HNPCC1)
28929483
A
P
622
L
088
UniProt
VAR_029244
P
623
A
MSH6_HUMAN
Polymorphism
3136334
B
P
623
A
089
UniProt
VAR_043953
P
623
L
MSH6_HUMAN
Unclassified
---
B
P
623
L
090
UniProt
VAR_043774
Q
629
R
MSH2_HUMAN
Unclassified
61756468
A
Q
629
R
091
UniProt
VAR_012944
A
636
P
MSH2_HUMAN
Disease (HNPCC1)
---
A
A
636
P
092
UniProt
VAR_054517
R
638
G
MSH2_HUMAN
Unclassified
---
A
R
638
G
093
UniProt
VAR_043775
H
639
R
MSH2_HUMAN
Disease (HNPCC1)
---
A
H
639
R
094
UniProt
VAR_004483
H
639
Y
MSH2_HUMAN
Disease (HNPCC1)
28929484
A
H
639
Y
095
UniProt
VAR_004484
C
641
G
MSH2_HUMAN
Polymorphism
---
A
C
641
G
096
UniProt
VAR_054518
Q
645
E
MSH2_HUMAN
Unclassified
---
A
Q
645
E
097
UniProt
VAR_043776
E
647
K
MSH2_HUMAN
Disease (HNPCC1)
---
A
E
647
K
098
UniProt
VAR_043777
Y
656
H
MSH2_HUMAN
Disease (HNPCC1)
---
A
Y
656
H
099
UniProt
VAR_022671
D
660
G
MSH2_HUMAN
Disease (HNPCC1)
---
A
D
660
G
100
UniProt
VAR_067761
G
669
R
MSH2_HUMAN
Disease (HNPCC1)
---
A
G
669
R
101
UniProt
VAR_038027
P
670
L
MSH2_HUMAN
Polymorphism
41294982
A
P
670
L
102
UniProt
VAR_043778
N
671
Y
MSH2_HUMAN
Unclassified
---
A
N
671
Y
103
UniProt
VAR_067288
G
674
R
MSH2_HUMAN
Disease (HNPCC1)
---
A
G
674
R
104
UniProt
VAR_004485
G
674
S
MSH2_HUMAN
Disease (HNPCC1)
---
A
G
674
S
105
UniProt
VAR_067289
K
675
A
MSH2_HUMAN
Unclassified
---
A
K
675
A
106
UniProt
VAR_068712
S
677
T
MSH6_HUMAN
Unclassified
---
B
S
677
T
107
UniProt
VAR_043779
I
679
T
MSH2_HUMAN
Disease (HNPCC1)
---
A
I
679
T
108
UniProt
VAR_043954
G
685
A
MSH6_HUMAN
Unclassified
---
B
G
685
A
109
UniProt
VAR_012945
M
688
I
MSH2_HUMAN
Disease (HNPCC1)
63750790
A
M
688
I
110
UniProt
VAR_009250
G
692
R
MSH2_HUMAN
Disease (HNPCC1)
---
A
G
692
R
111
UniProt
VAR_054519
P
696
L
MSH2_HUMAN
Unclassified
---
A
P
696
L
112
UniProt
VAR_004486
C
697
F
MSH2_HUMAN
Disease (HNPCC1)
---
A
C
697
F
113
UniProt
VAR_009251
C
697
R
MSH2_HUMAN
Disease (HNPCC1)
---
A
C
697
R
114
UniProt
VAR_012960
Q
698
E
MSH6_HUMAN
Unclassified
---
B
Q
698
E
115
UniProt
VAR_043781
S
723
F
MSH2_HUMAN
Disease (HNPCC1)
---
A
S
723
F
116
UniProt
VAR_043956
K
728
T
MSH6_HUMAN
Polymorphism
35552856
B
K
728
T
117
UniProt
VAR_043782
M
729
V
MSH2_HUMAN
Disease (HNPCC1)
---
A
M
729
V
118
UniProt
VAR_043783
T
732
I
MSH2_HUMAN
Disease (HNPCC1)
---
A
T
732
I
119
UniProt
VAR_054520
D
748
Y
MSH2_HUMAN
Unclassified
---
A
D
748
Y
120
UniProt
VAR_043785
E
749
K
MSH2_HUMAN
Disease (HNPCC1)
---
A
E
749
K
121
UniProt
VAR_067290
G
759
E
MSH2_HUMAN
Unclassified
---
A
G
759
E
122
UniProt
VAR_004487
I
770
V
MSH2_HUMAN
Polymorphism
---
A
I
770
V
123
UniProt
VAR_043957
R
772
Q
MSH6_HUMAN
Unclassified
---
B
R
772
Q
124
UniProt
VAR_043958
R
772
W
MSH6_HUMAN
Disease (HNPCC5)
---
B
R
772
W
125
UniProt
VAR_038028
M
779
I
MSH2_HUMAN
Polymorphism
41295292
A
M
779
I
126
UniProt
VAR_043959
A
787
V
MSH6_HUMAN
Unclassified
---
B
A
787
V
127
UniProt
VAR_043960
V
800
A
MSH6_HUMAN
Unclassified
---
B
V
800
A
128
UniProt
VAR_012961
V
800
L
MSH6_HUMAN
Polymorphism
---
B
V
800
L
129
UniProt
VAR_012962
D
803
G
MSH6_HUMAN
Unclassified
---
B
D
803
G
130
UniProt
VAR_067291
L
805
V
MSH2_HUMAN
Unclassified
---
A
L
805
V
131
UniProt
VAR_038029
T
807
S
MSH2_HUMAN
Polymorphism
41295294
A
T
807
S
132
UniProt
VAR_043786
M
813
V
MSH2_HUMAN
Disease (HNPCC1)
---
A
M
813
V
133
UniProt
VAR_043787
Q
824
E
MSH2_HUMAN
Unclassified
---
A
Q
824
E
134
UniProt
VAR_004488
A
834
T
MSH2_HUMAN
Disease (HNPCC1)
---
A
A
834
T
135
UniProt
VAR_038030
N
835
H
MSH2_HUMAN
Polymorphism
41295296
A
N
835
H
136
UniProt
VAR_054521
H
839
Q
MSH2_HUMAN
Unclassified
---
A
H
839
Q
137
UniProt
VAR_043788
H
839
R
MSH2_HUMAN
Disease (HNPCC1)
---
A
H
839
R
138
UniProt
VAR_067292
C
843
G
MSH2_HUMAN
Unclassified
---
A
C
843
G
139
UniProt
VAR_013172
K
845
E
MSH2_HUMAN
Disease (HNPCC1)
63750571
A
K
845
E
140
UniProt
VAR_012963
Y
850
C
MSH6_HUMAN
Unclassified
---
B
Y
850
C
141
UniProt
VAR_043789
E
853
A
MSH2_HUMAN
Unclassified
---
A
E
853
A
142
UniProt
VAR_043961
K
854
M
MSH6_HUMAN
Unclassified
34374438
B
K
854
M
143
UniProt
VAR_012964
V
878
A
MSH6_HUMAN
Unclassified
2020912
B
V
878
A
144
UniProt
VAR_014902
I
886
V
MSH6_HUMAN
Polymorphism
2020914
B
I
886
V
145
UniProt
VAR_043962
R
901
H
MSH6_HUMAN
Unclassified
---
B
R
901
H
146
UniProt
VAR_012965
R
976
H
MSH6_HUMAN
Unclassified
---
B
R
976
H
147
UniProt
VAR_043963
A
1021
D
MSH6_HUMAN
Unclassified
---
B
A
1021
D
148
UniProt
VAR_067297
D
1026
Y
MSH6_HUMAN
Unclassified
---
B
D
1026
Y
149
UniProt
VAR_043964
D
1031
V
MSH6_HUMAN
Unclassified
---
B
D
1031
V
150
UniProt
VAR_043965
R
1076
C
MSH6_HUMAN
Unclassified
---
B
R
1076
C
151
UniProt
VAR_067298
P
1087
S
MSH6_HUMAN
Unclassified
63750998
B
P
1087
S
152
UniProt
VAR_012966
P
1087
T
MSH6_HUMAN
Polymorphism
63750998
B
P
1087
T
153
UniProt
VAR_043966
R
1095
H
MSH6_HUMAN
Unclassified
---
B
R
1095
H
154
UniProt
VAR_043967
T
1100
M
MSH6_HUMAN
Unclassified
---
B
T
1100
M
155
UniProt
VAR_043968
C
1158
R
MSH6_HUMAN
Unclassified
---
B
C
1158
R
156
UniProt
VAR_043969
E
1163
V
MSH6_HUMAN
Disease (HNPCC5)
63750252
B
E
1163
V
157
UniProt
VAR_043970
E
1193
K
MSH6_HUMAN
Unclassified
---
B
E
1193
K
158
UniProt
VAR_004491
D
1213
V
MSH6_HUMAN
Polymorphism
---
B
D
1213
V
159
UniProt
VAR_043971
T
1219
I
MSH6_HUMAN
Unclassified
---
B
T
1219
I
160
UniProt
VAR_067299
T
1225
M
MSH6_HUMAN
Unclassified
---
B
T
1225
M
161
UniProt
VAR_038039
V
1232
L
MSH6_HUMAN
Polymorphism
41295276
B
V
1232
L
162
UniProt
VAR_038040
E
1234
Q
MSH6_HUMAN
Polymorphism
35717727
B
E
1234
Q
163
UniProt
VAR_043972
H
1248
D
MSH6_HUMAN
Unclassified
---
B
H
1248
D
164
UniProt
VAR_004492
V
1260
I
MSH6_HUMAN
Polymorphism
---
B
V
1260
I
165
UniProt
VAR_043973
T
1284
M
MSH6_HUMAN
Unclassified
---
B
T
1284
M
166
UniProt
VAR_038041
R
1321
G
MSH6_HUMAN
Polymorphism
41295278
B
R
1321
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: DNA_MISMATCH_REPAIR_2 (A:743-759,B:1208-1224)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DNA_MISMATCH_REPAIR_2
PS00486
DNA mismatch repair proteins mutS family signature.
MSH2_HUMAN
743-759
1
A:743-759
MSH6_HUMAN
1208-1224
1
B:1208-1224
[
close PROSITE info
]
Exons
(22, 22)
Info
All Exons
Exon 1.1a (A:1-71)
Exon 1.2a (A:71-122 (gaps))
Exon 1.3d (A:123-215 (gaps))
Exon 1.4 (A:216-264 (gaps))
Exon 1.5a (A:265-314)
Exon 1.6b (A:315-359 (gaps))
Exon 1.7b (A:359-426)
Exon 1.8 (A:426-462)
Exon 1.9b (A:463-504)
Exon 1.11b (A:504-554)
Exon 1.12 (A:554-587)
Exon 1.13 (A:587-669)
Exon 1.14 (A:669-737 (gaps))
Exon 1.15b (A:737-820)
Exon 1.16a (A:820-855)
Exon 2.8e (B:362-1058 (gaps))
Exon 2.9 (B:1058-1146 (gaps))
Exon 2.10 (B:1147-1178)
Exon 2.11 (B:1188-1216)
Exon 2.12 (B:1216-1267)
Exon 2.13 (B:1268-1334 (gaps))
Exon 2.14 (B:1334-1335)
View:
Select:
Label:
All Exon Boundaries
01: Boundary -/1.1a
02: Boundary 1.1a/1.2a
03: Boundary 1.2a/1.3d
04: Boundary 1.3d/1.4
05: Boundary 1.4/1.5a
06: Boundary 1.5a/1.6b
07: Boundary 1.6b/1.7b
08: Boundary 1.7b/1.8
09: Boundary 1.8/1.9b
10: Boundary 1.9b/1.11b
11: Boundary 1.11b/1.12
12: Boundary 1.12/1.13
13: Boundary 1.13/1.14
14: Boundary 1.14/1.15b
15: Boundary 1.15b/1.16a
16: Boundary 1.16a/1.17d
17: Boundary 2.7b/2.8e
18: Boundary 2.8e/2.9
19: Boundary 2.9/2.10
20: Boundary 2.10/2.11
21: Boundary 2.11/2.12
22: Boundary 2.12/2.13
23: Boundary 2.13/2.14
24: Boundary 2.14/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000233146
1a
ENSE00001828808
chr2:
47630108-47630541
434
MSH2_HUMAN
1-71
71
1
A:1-71
71
1.2a
ENST00000233146
2a
ENSE00001594573
chr2:
47635540-47635694
155
MSH2_HUMAN
71-122
52
1
A:71-122 (gaps)
52
1.3d
ENST00000233146
3d
ENSE00001645164
chr2:
47637233-47637511
279
MSH2_HUMAN
123-215
93
1
A:123-215 (gaps)
93
1.4
ENST00000233146
4
ENSE00001603119
chr2:
47639553-47639699
147
MSH2_HUMAN
216-264
49
1
A:216-264 (gaps)
49
1.5a
ENST00000233146
5a
ENSE00002141490
chr2:
47641408-47641557
150
MSH2_HUMAN
265-314
50
1
A:265-314
50
1.6b
ENST00000233146
6b
ENSE00001763598
chr2:
47643435-47643568
134
MSH2_HUMAN
315-359
45
1
A:315-359 (gaps)
45
1.7b
ENST00000233146
7b
ENSE00001619311
chr2:
47656881-47657080
200
MSH2_HUMAN
359-426
68
1
A:359-426
68
1.8
ENST00000233146
8
ENSE00001593828
chr2:
47672687-47672796
110
MSH2_HUMAN
426-462
37
1
A:426-462
37
1.9b
ENST00000233146
9b
ENSE00001800069
chr2:
47690170-47690293
124
MSH2_HUMAN
463-504
42
1
A:463-504
42
1.11b
ENST00000233146
11b
ENSE00001736524
chr2:
47693797-47693947
151
MSH2_HUMAN
504-554
51
1
A:504-554
51
1.12
ENST00000233146
12
ENSE00001637070
chr2:
47698104-47698201
98
MSH2_HUMAN
554-587
34
1
A:554-587
34
1.13
ENST00000233146
13
ENSE00001601622
chr2:
47702164-47702409
246
MSH2_HUMAN
587-669
83
1
A:587-669
83
1.14
ENST00000233146
14
ENSE00001741032
chr2:
47703506-47703710
205
MSH2_HUMAN
669-737
69
1
A:669-737 (gaps)
69
1.15b
ENST00000233146
15b
ENSE00001748882
chr2:
47705411-47705658
248
MSH2_HUMAN
737-820
84
1
A:737-820
84
1.16a
ENST00000233146
16a
ENSE00001679639
chr2:
47707835-47708010
176
MSH2_HUMAN
820-878
59
1
A:820-855
36
1.17d
ENST00000233146
17d
ENSE00001751045
chr2:
47709918-47710367
450
MSH2_HUMAN
879-934
56
0
-
-
2.1a
ENST00000234420
1a
ENSE00000809838
chr2:
48010221-48010632
412
MSH6_HUMAN
1-87
87
0
-
-
2.6
ENST00000234420
6
ENSE00001612913
chr2:
48018066-48018262
197
MSH6_HUMAN
87-153
67
0
-
-
2.7b
ENST00000234420
7b
ENSE00001651751
chr2:
48023033-48023202
170
MSH6_HUMAN
153-209
57
0
-
-
2.8e
ENST00000234420
8e
ENSE00001724021
chr2:
48025750-48028294
2545
MSH6_HUMAN
210-1058
849
1
B:362-1058 (gaps)
697
2.9
ENST00000234420
9
ENSE00001751404
chr2:
48030559-48030824
266
MSH6_HUMAN
1058-1146
89
1
B:1058-1146 (gaps)
89
2.10
ENST00000234420
10
ENSE00001689360
chr2:
48032049-48032166
118
MSH6_HUMAN
1147-1186
40
1
B:1147-1178
32
2.11
ENST00000234420
11
ENSE00001723456
chr2:
48032757-48032846
90
MSH6_HUMAN
1186-1216
31
1
B:1188-1216
29
2.12
ENST00000234420
12
ENSE00001792389
chr2:
48033343-48033497
155
MSH6_HUMAN
1216-1267
52
1
B:1216-1267
52
2.13
ENST00000234420
13
ENSE00001759163
chr2:
48033591-48033790
200
MSH6_HUMAN
1268-1334
67
1
B:1268-1334 (gaps)
67
2.14
ENST00000234420
14
ENSE00000809841
chr2:
48033918-48034092
175
MSH6_HUMAN
1334-1360
27
1
B:1334-1335
2
[
close EXON info
]
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
close CATH info
]
Pfam Domains
(5, 10)
Info
all PFAM domains
1a: PFAM_MutS_V_2o8fA01 (A:619-854)
1b: PFAM_MutS_V_2o8fB01 (B:1074-1326)
2a: PFAM_MutS_III_2o8fA02 (A:305-610)
2b: PFAM_MutS_III_2o8fB02 (B:737-1065)
3a: PFAM_MutS_II_2o8fA03 (A:145-290)
3b: PFAM_MutS_II_2o8fB03 (B:537-703)
4a: PFAM_MutS_IV_2o8fA04 (A:473-569)
4b: PFAM_MutS_IV_2o8fB04 (B:932-1024)
5a: PFAM_MutS_I_2o8fA05 (A:17-132)
5b: PFAM_MutS_I_2o8fB05 (B:407-526)
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Clan
:
P-loop_NTPase
(1112)
Family
:
MutS_V
(16)
Homo sapiens (Human)
(5)
1a
MutS_V-2o8fA01
A:619-854
1b
MutS_V-2o8fB01
B:1074-1326
Clan
:
no clan defined [family: MutS_III]
(16)
Family
:
MutS_III
(16)
Homo sapiens (Human)
(5)
2a
MutS_III-2o8fA02
A:305-610
2b
MutS_III-2o8fB02
B:737-1065
Clan
:
no clan defined [family: MutS_II]
(16)
Family
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MutS_II
(16)
Homo sapiens (Human)
(5)
3a
MutS_II-2o8fA03
A:145-290
3b
MutS_II-2o8fB03
B:537-703
Clan
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no clan defined [family: MutS_IV]
(16)
Family
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MutS_IV
(16)
Homo sapiens (Human)
(5)
4a
MutS_IV-2o8fA04
A:473-569
4b
MutS_IV-2o8fB04
B:932-1024
Clan
:
no clan defined [family: MutS_I]
(16)
Family
:
MutS_I
(16)
Homo sapiens (Human)
(5)
5a
MutS_I-2o8fA05
A:17-132
5b
MutS_I-2o8fB05
B:407-526
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