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2O5S
Asym. Unit
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Asym.Unit (34 KB)
Biol.Unit 1 (30 KB)
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(1)
Title
:
COBALT HORSE HEART MYOGLOBIN, NITRITE MODIFIED
Authors
:
G. B. Richter-Addo, Z. N. Zahran, L. Chooback, D. M. Copeland, A. H. West
Date
:
06 Dec 06 (Deposition) - 16 Oct 07 (Release) - 20 Oct 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : X
Biol. Unit 1: X (1x)
Keywords
:
Cobalt Horse Heart Myoglobin, Cobalt Protoporphyrin Ix, Nitrite, Oxygen Storage-Transport Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. N. Zahran, L. Chooback, D. M. Copeland, A. H. West, G. B. Richter-Add
Crystal Structures Of Manganese- And Cobalt-Substituted Myoglobin In Complex With No And Nitrite Reveal Unusual Ligand Conformations.
J. Inorg. Biochem. V. 102 216 2008
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Hetero Components
(3, 4)
Info
All Hetero Components
1a: PROTOPORPHYRIN IX CONTAINING CO (COHa)
2a: NITRITE ION (NO2a)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
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No.
Name
Count
Type
Full Name
1
COH
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING CO
2
NO2
1
Ligand/Ion
NITRITE ION
3
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA X:57 , SER X:58 , GLU X:59 , ASP X:60 , HOH X:230 , HOH X:248
BINDING SITE FOR RESIDUE SO4 X 157
2
AC2
SOFTWARE
HIS X:81 , HIS X:82 , GLU X:83 , HOH X:191 , HOH X:320
BINDING SITE FOR RESIDUE SO4 X 158
3
AC3
SOFTWARE
LEU X:29 , PHE X:43 , HIS X:64 , VAL X:68 , COH X:154
BINDING SITE FOR RESIDUE NO2 X 159
4
AC4
SOFTWARE
THR X:39 , LYS X:42 , PHE X:43 , LYS X:45 , VAL X:68 , ALA X:71 , LEU X:89 , SER X:92 , HIS X:93 , HIS X:97 , ILE X:99 , TYR X:103 , HIS X:113 , HIS X:116 , GLN X:128 , PHE X:138 , NO2 X:159 , HOH X:247 , HOH X:253 , HOH X:259 , HOH X:271 , HOH X:306
BINDING SITE FOR RESIDUE COH X 154
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: GLOBIN (X:2-147)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLOBIN
PS01033
Globin family profile.
MYG_HORSE
3-148
1
X:2-147
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
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1a: SCOP_d2o5sx_ (X:)
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Class
:
All alpha proteins
(14657)
Fold
:
Globin-like
(1351)
Superfamily
:
Globin-like
(1308)
Family
:
Globins
(1157)
Protein domain
:
Myoglobin
(324)
Horse (Equus caballus) [TaxId: 9796]
(62)
1a
d2o5sx_
X:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2o5sX00 (X:1-152)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Globin-like
(786)
Homologous Superfamily
:
Globins
(743)
Horse (Equus caballus)
(63)
1a
2o5sX00
X:1-152
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Globin_2o5sX01 (X:6-112)
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Clan
:
Globin
(291)
Family
:
Globin
(264)
Equus caballus (Horse)
(45)
1a
Globin-2o5sX01
X:6-112
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