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2NZY
Biol. Unit 2
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Asym.Unit (207 KB)
Biol.Unit 1 (133 KB)
Biol.Unit 2 (139 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ALPHA1,3-FUCOSYLTRANSFERASE WITH GDP-FUCOSE
Authors
:
H. Y. Sun, T. P. Ko
Date
:
27 Nov 06 (Deposition) - 23 Jan 07 (Release) - 05 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C (2x)
Keywords
:
Alpha1, 3-Fucosyltransferase, Fucosyltransferase, Fuct, Gt 10, Transferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Y. Sun, S. W. Lin, T. P. Ko, J. F. Pan, C. L. Liu, C. N. Lin, A. H. Wang, C. H. Lin
Structure And Mechanism Of Helicobacter Pylori Fucosyltransferase. A Basis For Lipopolysaccharide Variatio And Inhibitor Design.
J. Biol. Chem. V. 282 9973 2007
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Hetero Components
(3, 6)
Info
All Hetero Components
1a: ALPHA-L-FUCOSE (FUCa)
1b: ALPHA-L-FUCOSE (FUCb)
1c: ALPHA-L-FUCOSE (FUCc)
2a: GUANOSINE-5'-DIPHOSPHATE (GDPa)
2b: GUANOSINE-5'-DIPHOSPHATE (GDPb)
2c: GUANOSINE-5'-DIPHOSPHATE (GDPc)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
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No.
Name
Count
Type
Full Name
1
FUC
2
Ligand/Ion
ALPHA-L-FUCOSE
2
GDP
2
Ligand/Ion
GUANOSINE-5'-DIPHOSPHATE
3
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(3, 3)
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All Sites
1: AC3 (SOFTWARE)
2: AC5 (SOFTWARE)
3: AC8 (SOFTWARE)
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Name
Evidence
Residues
Description
1
AC3
SOFTWARE
GLY C:94 , LEU C:124 , ASN C:240 , TYR C:246 , THR C:248 , GLU C:249 , LYS C:250 , GDP C:3003
BINDING SITE FOR RESIDUE FUC C 4003
2
AC5
SOFTWARE
HIS C:300 , LYS C:301 , ASN C:302 , ALA C:303 , HOH C:4096
BINDING SITE FOR RESIDUE SO4 C 2002
3
AC8
SOFTWARE
VAL C:186 , ALA C:187 , SER C:188 , ASN C:189 , ARG C:195 , GLY C:212 , ASN C:221 , VAL C:222 , LYS C:223 , LYS C:225 , ASN C:240 , GLU C:249 , LYS C:250 , FUC C:4003 , HOH C:4085 , HOH C:4187
BINDING SITE FOR RESIDUE GDP C 3003
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d2nzya_ (A:)
1b: SCOP_d2nzyb_ (B:)
1c: SCOP_d2nzyc_ (C:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
UDP-Glycosyltransferase/glycogen phosphorylase
(296)
Superfamily
:
UDP-Glycosyltransferase/glycogen phosphorylase
(296)
Family
:
FucT-like
(3)
Protein domain
:
Alpha1,3-fucosyltransferase FucT
(3)
Helicobacter pylori [TaxId: 210]
(3)
1a
d2nzya_
A:
1b
d2nzyb_
B:
1c
d2nzyc_
C:
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CATH Domains
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Pfam Domains
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Asym.Unit (207 KB)
Header - Asym.Unit
Biol.Unit 1 (133 KB)
Header - Biol.Unit 1
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