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2NWC
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Asym.Unit (1.0 MB)
Biol.Unit 1, α-C (1.0 MB)
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(1)
Title
:
A 3.02 ANGSTROM CRYSTAL STRUCTURE OF WILD-TYPE APO GROEL IN A MONOCLINIC SPACE GROUP
Authors
:
P. D. Kiser, D. T. Lodowski, K. Palczewski
Date
:
14 Nov 06 (Deposition) - 22 May 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.02
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N (1x)
Keywords
:
Chaperonin, Hsp60, Chaperone
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
P. D. Kiser, D. T. Lodowski, K. Palczewski
Purification, Crystallization And Structure Determination Of Native Groel From Escherichia Coli Lacking Bound Potassium Ions
Acta Crystallogr. , Sect. F V. 63 457 2007
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 14)
Info
All PROSITE Patterns/Profiles
1: CHAPERONINS_CPN60 (A:405-416,B:405-416,C:405-416,D:40...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CHAPERONINS_CPN60
PS00296
Chaperonins cpn60 signature.
CH60_ECOLI
405-416
14
A:405-416
B:405-416
C:405-416
D:405-416
E:405-416
F:405-416
G:405-416
H:405-416
I:405-416
J:405-416
K:405-416
L:405-416
M:405-416
N:405-416
CH60_ECOUT
405-416
14
A:405-416
B:405-416
C:405-416
D:405-416
E:405-416
F:405-416
G:405-416
H:405-416
I:405-416
J:405-416
K:405-416
L:405-416
M:405-416
N:405-416
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
(3, 42)
Info
all CATH domains
1a: CATH_2nwcA02 (A:136-191,A:373-410)
1b: CATH_2nwcB02 (B:136-191,B:373-410)
1c: CATH_2nwcC02 (C:136-191,C:373-410)
1d: CATH_2nwcD02 (D:136-191,D:373-410)
1e: CATH_2nwcE02 (E:136-191,E:373-410)
1f: CATH_2nwcF02 (F:136-191,F:373-410)
1g: CATH_2nwcG02 (G:136-191,G:373-410)
1h: CATH_2nwcH02 (H:136-191,H:373-410)
1i: CATH_2nwcI02 (I:136-191,I:373-410)
1j: CATH_2nwcJ02 (J:136-191,J:373-410)
1k: CATH_2nwcK02 (K:136-191,K:373-410)
1l: CATH_2nwcL02 (L:136-191,L:373-410)
1m: CATH_2nwcM02 (M:136-191,M:373-410)
1n: CATH_2nwcN02 (N:136-191,N:373-410)
2a: CATH_2nwcA03 (A:192-372)
2b: CATH_2nwcB03 (B:192-372)
2c: CATH_2nwcC03 (C:192-372)
2d: CATH_2nwcD03 (D:192-372)
2e: CATH_2nwcE03 (E:192-372)
2f: CATH_2nwcF03 (F:192-372)
2g: CATH_2nwcG03 (G:192-372)
2h: CATH_2nwcH03 (H:192-372)
2i: CATH_2nwcI03 (I:192-372)
2j: CATH_2nwcJ03 (J:192-372)
2k: CATH_2nwcK03 (K:192-372)
2l: CATH_2nwcL03 (L:192-372)
2m: CATH_2nwcM03 (M:192-372)
2n: CATH_2nwcN03 (N:192-372)
3a: CATH_2nwcA01 (A:2-135,A:411-525)
3b: CATH_2nwcB01 (B:2-135,B:411-525)
3c: CATH_2nwcC01 (C:2-135,C:411-525)
3d: CATH_2nwcD01 (D:2-135,D:411-525)
3e: CATH_2nwcE01 (E:2-135,E:411-525)
3f: CATH_2nwcF01 (F:2-135,F:411-525)
3g: CATH_2nwcG01 (G:2-135,G:411-525)
3h: CATH_2nwcH01 (H:2-135,H:411-525)
3i: CATH_2nwcI01 (I:2-135,I:411-525)
3j: CATH_2nwcJ01 (J:2-135,J:411-525)
3k: CATH_2nwcK01 (K:2-135,K:411-525)
3l: CATH_2nwcL01 (L:2-135,L:411-525)
3m: CATH_2nwcM01 (M:2-135,M:411-525)
3n: CATH_2nwcN01 (N:2-135,N:411-525)
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)
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)
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)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
GROEL; domain 2
(26)
Homologous Superfamily
:
GROEL, domain 2
(26)
Escherichia coli. Organism_taxid: 562.
(7)
1a
2nwcA02
A:136-191,A:373-410
1b
2nwcB02
B:136-191,B:373-410
1c
2nwcC02
C:136-191,C:373-410
1d
2nwcD02
D:136-191,D:373-410
1e
2nwcE02
E:136-191,E:373-410
1f
2nwcF02
F:136-191,F:373-410
1g
2nwcG02
G:136-191,G:373-410
1h
2nwcH02
H:136-191,H:373-410
1i
2nwcI02
I:136-191,I:373-410
1j
2nwcJ02
J:136-191,J:373-410
1k
2nwcK02
K:136-191,K:373-410
1l
2nwcL02
L:136-191,L:373-410
1m
2nwcM02
M:136-191,M:373-410
1n
2nwcN02
N:136-191,N:373-410
Architecture
:
3-Layer(bba) Sandwich
(528)
Topology
:
GroEL
(39)
Homologous Superfamily
:
GroEL
(39)
Escherichia coli. Organism_taxid: 562.
(7)
2a
2nwcA03
A:192-372
2b
2nwcB03
B:192-372
2c
2nwcC03
C:192-372
2d
2nwcD03
D:192-372
2e
2nwcE03
E:192-372
2f
2nwcF03
F:192-372
2g
2nwcG03
G:192-372
2h
2nwcH03
H:192-372
2i
2nwcI03
I:192-372
2j
2nwcJ03
J:192-372
2k
2nwcK03
K:192-372
2l
2nwcL03
L:192-372
2m
2nwcM03
M:192-372
2n
2nwcN03
N:192-372
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
GROEL; domain 1
(26)
Homologous Superfamily
:
GROEL, domain 1
(26)
Escherichia coli. Organism_taxid: 562.
(7)
3a
2nwcA01
A:2-135,A:411-525
3b
2nwcB01
B:2-135,B:411-525
3c
2nwcC01
C:2-135,C:411-525
3d
2nwcD01
D:2-135,D:411-525
3e
2nwcE01
E:2-135,E:411-525
3f
2nwcF01
F:2-135,F:411-525
3g
2nwcG01
G:2-135,G:411-525
3h
2nwcH01
H:2-135,H:411-525
3i
2nwcI01
I:2-135,I:411-525
3j
2nwcJ01
J:2-135,J:411-525
3k
2nwcK01
K:2-135,K:411-525
3l
2nwcL01
L:2-135,L:411-525
3m
2nwcM01
M:2-135,M:411-525
3n
2nwcN01
N:2-135,N:411-525
[
close CATH info
]
Pfam Domains
(1, 14)
Info
all PFAM domains
1a: PFAM_Cpn60_TCP1_2nwcN01 (N:23-525)
1b: PFAM_Cpn60_TCP1_2nwcN02 (N:23-525)
1c: PFAM_Cpn60_TCP1_2nwcN03 (N:23-525)
1d: PFAM_Cpn60_TCP1_2nwcN04 (N:23-525)
1e: PFAM_Cpn60_TCP1_2nwcN05 (N:23-525)
1f: PFAM_Cpn60_TCP1_2nwcN06 (N:23-525)
1g: PFAM_Cpn60_TCP1_2nwcN07 (N:23-525)
1h: PFAM_Cpn60_TCP1_2nwcN08 (N:23-525)
1i: PFAM_Cpn60_TCP1_2nwcN09 (N:23-525)
1j: PFAM_Cpn60_TCP1_2nwcN10 (N:23-525)
1k: PFAM_Cpn60_TCP1_2nwcN11 (N:23-525)
1l: PFAM_Cpn60_TCP1_2nwcN12 (N:23-525)
1m: PFAM_Cpn60_TCP1_2nwcN13 (N:23-525)
1n: PFAM_Cpn60_TCP1_2nwcN14 (N:23-525)
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Clans
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)
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)
Families
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)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: Cpn60_TCP1]
(28)
Family
:
Cpn60_TCP1
(28)
Escherichia coli (strain K12)
(13)
1a
Cpn60_TCP1-2nwcN01
N:23-525
1b
Cpn60_TCP1-2nwcN02
N:23-525
1c
Cpn60_TCP1-2nwcN03
N:23-525
1d
Cpn60_TCP1-2nwcN04
N:23-525
1e
Cpn60_TCP1-2nwcN05
N:23-525
1f
Cpn60_TCP1-2nwcN06
N:23-525
1g
Cpn60_TCP1-2nwcN07
N:23-525
1h
Cpn60_TCP1-2nwcN08
N:23-525
1i
Cpn60_TCP1-2nwcN09
N:23-525
1j
Cpn60_TCP1-2nwcN10
N:23-525
1k
Cpn60_TCP1-2nwcN11
N:23-525
1l
Cpn60_TCP1-2nwcN12
N:23-525
1m
Cpn60_TCP1-2nwcN13
N:23-525
1n
Cpn60_TCP1-2nwcN14
N:23-525
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