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Asym. Unit
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Asym.Unit (449 KB)
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Models
(16 )
Title
:
SOLUTION STRUCTURE OF THE RRM DOMAIN OF HUMAN EUKARYOTIC INITIATION FACTOR 3B
Authors
:
L. Elantak, A. G. Tzakos, N. Locker, P. J. Lukavsky
Date
:
20 Oct 06 (Deposition) - 06 Feb 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (16 x)
Keywords
:
Translation Initiation, Eukaryotic Initiation Factor 3 Complex, Rna Recognition Motif
(Keyword Search:
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)
Reference
:
L. Elantak, A. G. Tzakos, N. Locker, P. J. Lukavsky
Structure Of Eif3B Rna Recognition Motif And Its Interaction With Eif3J: Structural Insights Into The Recruitment Of Eif3B To The 40 S Ribosomal Subunit.
J. Biol. Chem. V. 282 8165 2007
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 1)
Info
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1: RRM (A:16-99)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RRM
PS50102
Eukaryotic RNA Recognition Motif (RRM) profile.
EIF3B_HUMAN
185-268
1
A:16-99
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Exons
(3, 3)
Info
All Exons
Exon 1.3 (A:1-62)
Exon 1.4 (A:62-102)
Exon 1.5b (A:102-105)
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All Exon Boundaries
1: Boundary 1.2c/1.3
2: Boundary 1.3/1.4
3: Boundary 1.4/1.5b
4: Boundary 1.5b/1.6
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2c
ENST00000397011
2c
ENSE00001920573
chr7:
2394517-2395055
539
EIF3B_HUMAN
1-167
167
0
-
-
1.3
ENST00000397011
3
ENSE00001597937
chr7:
2400345-2400537
193
EIF3B_HUMAN
167-231
65
1
A:1-62
62
1.4
ENST00000397011
4
ENSE00001668687
chr7:
2402280-2402399
120
EIF3B_HUMAN
231-271
41
1
A:62-102
41
1.5b
ENST00000397011
5b
ENSE00001798418
chr7:
2402705-2402762
58
EIF3B_HUMAN
271-290
20
1
A:102-105
4
1.6
ENST00000397011
6
ENSE00000667963
chr7:
2403267-2403395
129
EIF3B_HUMAN
291-333
43
0
-
-
1.7d
ENST00000397011
7d
ENSE00001182300
chr7:
2404007-2404164
158
EIF3B_HUMAN
334-386
53
0
-
-
1.8b
ENST00000397011
8b
ENSE00000831521
chr7:
2405952-2406083
132
EIF3B_HUMAN
386-430
45
0
-
-
1.8f
ENST00000397011
8f
ENSE00000831523
chr7:
2406160-2406226
67
EIF3B_HUMAN
430-452
23
0
-
-
1.8i
ENST00000397011
8i
ENSE00000831525
chr7:
2406634-2406680
47
EIF3B_HUMAN
453-468
16
0
-
-
1.9b
ENST00000397011
9b
ENSE00000831527
chr7:
2409107-2409317
211
EIF3B_HUMAN
468-538
71
0
-
-
1.10a
ENST00000397011
10a
ENSE00000831529
chr7:
2411412-2411484
73
EIF3B_HUMAN
539-563
25
0
-
-
1.11
ENST00000397011
11
ENSE00000831531
chr7:
2412308-2412430
123
EIF3B_HUMAN
563-604
42
0
-
-
1.12b
ENST00000397011
12b
ENSE00000831533
chr7:
2414163-2414241
79
EIF3B_HUMAN
604-630
27
0
-
-
1.12d
ENST00000397011
12d
ENSE00000831535
chr7:
2415024-2415162
139
EIF3B_HUMAN
630-676
47
0
-
-
1.12f
ENST00000397011
12f
ENSE00000831536
chr7:
2416585-2416710
126
EIF3B_HUMAN
677-718
42
0
-
-
1.13c
ENST00000397011
13c
ENSE00000831538
chr7:
2418324-2418401
78
EIF3B_HUMAN
719-744
26
0
-
-
1.13e
ENST00000397011
13e
ENSE00000831540
chr7:
2418769-2418877
109
EIF3B_HUMAN
745-781
37
0
-
-
1.14b
ENST00000397011
14b
ENSE00001272873
chr7:
2419029-2419146
118
EIF3B_HUMAN
781-814
34
0
-
-
1.14j
ENST00000397011
14j
ENSE00001921552
chr7:
2419914-2420380
467
EIF3B_HUMAN
-
0
0
-
-
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SCOP Domains
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_RRM_1_2nlwA01 (A:34-91)
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Clan
:
RRM
(206)
Family
:
RRM_1
(131)
Homo sapiens (Human)
(94)
1a
RRM_1-2nlwA01
A:34-91
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