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2N0X
Asym. Unit
Info
Asym.Unit (91 KB)
Biol.Unit 1 (6 KB)
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Models
(20 )
Title
:
THREE DIMENSIONAL STRUCTURE OF EPI-X4, A HUMAN ALBUMIN-DERIVED PEPTIDE THAT REGULATES INNATE IMMUNITY THROUGH THE CXCR4/CXCL12 CHEMOTACTIC AXIS AND ANTAGONIZES HIV-1 ENTRY
Authors
:
J. Perez-Castells, A. Canales, J. Jimenez-Barbero, G. Gimenez-Galle
Date
:
18 Mar 15 (Deposition) - 29 Apr 15 (Release) - 20 May 15 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Biol. Unit 1: A (1x)
Keywords
:
Antagonist, Inhibitor Peptide, Peptide Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
O. Zirafi, K. A. Kim, L. Standker, K. B. Mohr, D. Sauter, A. Heigele, S. F. Kluge, E. Wiercinska, D. Chudziak, R. Richter, B. Moepps, P. Gierschik, V. Vas, H. Geiger, M. Lamla, T. Weil, T. Burster, A. Zgraja, F. Daubeuf, N. Frossard, M. Hachet-Haas, F. Heunisch, C. Reichetzeder, J. L. Galzi, J. Perez-Castells, A. Canales-Mayordomo, J. Jimenez-Barbero, G. Gimenez-Gallego, M. Schneider, J. Shorter, A. Telenti, B. Hocher, W. G. Forssmann, H. Bonig, F. Kirchhoff, J. Munch
Discovery And Characterization Of An Endogenous Cxcr4 Antagonist.
Cell Rep V. 11 737 2015
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_013017 (R3C, chain A, )
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_013017
R
434
C
ALBU_HUMAN
Polymorphism
78575701
A
R
3
C
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(1, 1)
Info
All Exons
Exon 1.13b (A:1-16)
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All Exon Boundaries
1: Boundary 1.12/1.13b
2: Boundary 1.13b/1.14b
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000295897
2a
ENSE00002075693
chr4:
74269956-74270123
168
ALBU_HUMAN
1-27
27
0
-
-
1.3a
ENST00000295897
3a
ENSE00001076782
chr4:
74270833-74270890
58
ALBU_HUMAN
27-46
20
0
-
-
1.4b
ENST00000295897
4b
ENSE00001076799
chr4:
74272346-74272478
133
ALBU_HUMAN
46-90
45
0
-
-
1.5a
ENST00000295897
5a
ENSE00001076811
chr4:
74274311-74274522
212
ALBU_HUMAN
91-161
71
0
-
-
1.7d
ENST00000295897
7d
ENSE00001076808
chr4:
74275072-74275204
133
ALBU_HUMAN
161-205
45
0
-
-
1.8a
ENST00000295897
8a
ENSE00001076797
chr4:
74276029-74276126
98
ALBU_HUMAN
206-238
33
0
-
-
1.9a
ENST00000295897
9a
ENSE00001076788
chr4:
74277713-74277842
130
ALBU_HUMAN
238-281
44
0
-
-
1.10b
ENST00000295897
10b
ENSE00001076792
chr4:
74279137-74279351
215
ALBU_HUMAN
282-353
72
0
-
-
1.11a
ENST00000295897
11a
ENSE00001076805
chr4:
74280752-74280884
133
ALBU_HUMAN
353-397
45
0
-
-
1.12
ENST00000295897
12
ENSE00001076781
chr4:
74281973-74282070
98
ALBU_HUMAN
398-430
33
0
-
-
1.13b
ENST00000295897
13b
ENSE00001076796
chr4:
74283248-74283386
139
ALBU_HUMAN
430-476
47
1
A:1-16
16
1.14b
ENST00000295897
14b
ENSE00001076790
chr4:
74283805-74284028
224
ALBU_HUMAN
477-551
75
0
-
-
1.16b
ENST00000295897
16b
ENSE00001076802
chr4:
74285224-74285356
133
ALBU_HUMAN
551-595
45
0
-
-
1.18a
ENST00000295897
18a
ENSE00001076795
chr4:
74285971-74286038
68
ALBU_HUMAN
596-609
14
0
-
-
1.20j
ENST00000295897
20j
ENSE00001823230
chr4:
74286809-74287129
321
ALBU_HUMAN
-
0
0
-
-
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SCOP Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (91 KB)
Header - Asym.Unit
Biol.Unit 1 (6 KB)
Header - Biol.Unit 1
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