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2MD4
Asym. Unit
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Asym.Unit (35 KB)
Biol.Unit 1 (5 KB)
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Models
(10 )
Title
:
FRAGMENT BASED APPROACH AND BINDING BEHAVIOR OF LFAMPINB WITH LIPOPOLYSACCHARIDE: BIOPHYSICAL ASPECTS
Authors
:
A. Bhunia, S. Chatterjee, A. Ghosh, J. Jana
Date
:
29 Aug 13 (Deposition) - 25 Sep 13 (Release) - 02 Sep 15 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (10 x)
Biol. Unit 1: A (1x)
Keywords
:
Antimicrobial Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Ghosh, A. Datta, J. Jana, R. K. Kar, C. Chatterjee, S. Chatterjee, A. Bhunia
Sequence Context Induced Antimicrobial Activity: Insight Into Lipopolysaccharide Permeabilization.
Mol Biosyst V. 10 1596 2014
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(2, 2)
Info
All Exons
Exon 1.7 (A:1-8)
Exon 1.8 (A:9-12)
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1: Boundary 1.6/1.7
2: Boundary 1.7/1.8
3: Boundary 1.8/1.9
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000001704
1
ENSBTAE00000406255
chr22:
54313830-54314011
182
TRFL_BOVIN
1-15
15
0
-
-
1.2
ENSBTAT00000001704
2
ENSBTAE00000391946
chr22:
54317754-54317917
164
TRFL_BOVIN
15-69
55
0
-
-
1.3
ENSBTAT00000001704
3
ENSBTAE00000378931
chr22:
54320894-54321002
109
TRFL_BOVIN
70-106
37
0
-
-
1.4
ENSBTAT00000001704
4
ENSBTAE00000247433
chr22:
54321299-54321481
183
TRFL_BOVIN
106-167
62
0
-
-
1.5
ENSBTAT00000001704
5
ENSBTAE00000013647
chr22:
54322098-54322245
148
TRFL_BOVIN
167-216
50
0
-
-
1.6
ENSBTAT00000001704
6
ENSBTAE00000247432
chr22:
54323189-54323244
56
TRFL_BOVIN
216-235
20
0
-
-
1.7
ENSBTAT00000001704
7
ENSBTAE00000013649
chr22:
54328592-54328770
179
TRFL_BOVIN
235-294
60
1
A:1-8
8
1.8
ENSBTAT00000001704
8
ENSBTAE00000013654
chr22:
54329198-54329372
175
TRFL_BOVIN
295-353
59
1
A:9-12
4
1.9
ENSBTAT00000001704
9
ENSBTAE00000013658
chr22:
54329898-54330052
155
TRFL_BOVIN
353-404
52
0
-
-
1.10
ENSBTAT00000001704
10
ENSBTAE00000013661
chr22:
54332009-54332099
91
TRFL_BOVIN
405-435
31
0
-
-
1.11
ENSBTAT00000001704
11
ENSBTAE00000013664
chr22:
54334326-54334373
48
TRFL_BOVIN
435-451
17
0
-
-
1.12
ENSBTAT00000001704
12
ENSBTAE00000013668
chr22:
54334997-54335152
156
TRFL_BOVIN
451-503
53
0
-
-
1.13
ENSBTAT00000001704
13
ENSBTAE00000013670
chr22:
54337061-54337202
142
TRFL_BOVIN
503-550
48
0
-
-
1.14
ENSBTAT00000001704
14
ENSBTAE00000013674
chr22:
54341961-54342028
68
TRFL_BOVIN
550-573
24
0
-
-
1.15
ENSBTAT00000001704
15
ENSBTAE00000013678
chr22:
54343949-54344133
185
TRFL_BOVIN
573-634
62
0
-
-
1.16
ENSBTAT00000001704
16
ENSBTAE00000429733
chr22:
54345264-54345453
190
TRFL_BOVIN
635-698
64
0
-
-
1.17
ENSBTAT00000001704
17
ENSBTAE00000407091
chr22:
54347010-54347235
226
TRFL_BOVIN
698-708
11
0
-
-
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (35 KB)
Header - Asym.Unit
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