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2M49
Asym. Unit
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Asym.Unit (1.3 MB)
Biol.Unit 1 (132 KB)
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Models
(10 )
Title
:
STRUCTURAL INSIGHTS INTO HUMAN S100B AND BASIC FIBROBLAST GROWTH FACTOR (FGF2) INTERACTION
Authors
:
A. A. Gupta, C. Yu
Date
:
03 Feb 13 (Deposition) - 18 Dec 13 (Release) - 18 Dec 13 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B,C,D (10 x)
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
S100B, Fgf2, Cytokine-Metal Binding Protein Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
A. A. Gupta, R. H. Chou, H. Li, L. W. Yang, C. Yu
Structural Insights Into The Interaction Of Human S100B And Basic Fibroblast Growth Factor (Fgf2): Effects On Fgfr1 Receptor Signaling
Biochim. Biophys. Acta V. 1834 2606 2013
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(4, 8)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (B:48-83,D:139-174)
2: S100_CABP (B:56-77,D:147-168)
3: EF_HAND_1 (B:61-73,D:152-164)
4: HBGF_FGF (A:80-103,C:80-103)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
S100B_HUMAN
49-84
2
B:48-83
D:139-174
2
S100_CABP
PS00303
S-100/ICaBP type calcium binding protein signature.
S100B_HUMAN
57-78
2
B:56-77
D:147-168
3
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
S100B_HUMAN
62-74
2
B:61-73
D:152-164
4
HBGF_FGF
PS00247
HBGF/FGF family signature.
FGF2_HUMAN
222-245
2
A:80-103
C:80-103
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Exons
(5, 10)
Info
All Exons
Exon 1.1 (A:19-51 | C:19-51)
Exon 1.2 (A:51-85 | C:51-85)
Exon 1.3b (A:86-144 | C:86-144)
Exon 2.2a (B:1-45 | D:92-136)
Exon 2.4a (B:46-91 | D:137-182)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3b
4: Boundary 1.3b/-
5: Boundary -/2.2a
6: Boundary 2.2a/2.4a
7: Boundary 2.4a/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000264498
1
ENSE00001081612
chr4:
123747863-123748507
645
FGF2_HUMAN
1-193
193
2
A:19-51
C:19-51
33
33
1.2
ENST00000264498
2
ENSE00000970285
chr4:
123797476-123797579
104
FGF2_HUMAN
193-227
35
2
A:51-85
C:51-85
35
35
1.3b
ENST00000264498
3b
ENSE00001081614
chr4:
123813366-123819391
6026
FGF2_HUMAN
228-288
61
2
A:86-144
C:86-144
59
59
2.2a
ENST00000397648
2a
ENSE00001529559
chr21:
48022806-48022191
616
S100B_HUMAN
1-46
46
2
B:1-45
D:92-136
45
45
2.4a
ENST00000397648
4a
ENSE00001529558
chr21:
48019416-48019194
223
S100B_HUMAN
47-92
46
2
B:46-91
D:137-182
46
46
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d2m49b_ (B:)
1b: SCOP_d2m49d_ (D:)
2a: SCOP_d2m49a_ (A:)
2b: SCOP_d2m49c_ (C:)
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Protein Domains
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Organisms
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(
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Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
S100 proteins
(101)
Protein domain
:
Calcyclin (S100)
(69)
Human (Homo sapiens), s100b [TaxId: 9606]
(7)
1a
d2m49b_
B:
1b
d2m49d_
D:
Class
:
All beta proteins
(24004)
Fold
:
beta-Trefoil
(385)
Superfamily
:
Cytokine
(169)
Family
:
Fibroblast growth factors (FGF)
(120)
Protein domain
:
automated matches
(7)
Human (Homo sapiens) [TaxId: 9606]
(5)
2a
d2m49a_
A:
2b
d2m49c_
C:
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (1.3 MB)
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Biol.Unit 1 (132 KB)
Header - Biol.Unit 1
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