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2M16
Asym. Unit
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Asym.Unit (591 KB)
Biol.Unit 1 (31 KB)
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Models
(20 )
Title
:
P75/LEDGF PWWP DOMAIN
Authors
:
B. L. Crowe, M. P. Foster
Date
:
18 Nov 12 (Deposition) - 27 Feb 13 (Release) - 17 Apr 13 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Biol. Unit 1: A (1x)
Keywords
:
Protein, Pwwp Domain, Transcription, Dna Binding
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. O. Eidahl, B. L. Crowe, J. A. North, C. J. Mckee, N. Shkriabai, L. Feng M. Plumb, R. L. Graham, R. J. Gorelick, S. Hess, M. G. Poirier, M. P. Foster, M. Kvaratskhelia
Structural Basis For High-Affinity Binding Of Ledgf Pwwp To Mononucleosomes.
Nucleic Acids Res. V. 41 3924 2013
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PWWP (A:7-64)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PWWP
PS50812
PWWP domain profile.
PSIP1_HUMAN
7-64
1
A:7-64
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Exons
(3, 3)
Info
All Exons
Exon 1.2b (A:1-24)
Exon 1.3a (A:25-50)
Exon 1.5 (A:50-93)
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All Exon Boundaries
1: Boundary 1.1b/1.2b
2: Boundary 1.2b/1.3a
3: Boundary 1.3a/1.5
4: Boundary 1.5/1.7
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000380738
1b
ENSE00001871552
chr9:
15510993-15510815
179
PSIP1_HUMAN
-
0
0
-
-
1.2b
ENST00000380738
2b
ENSE00002140211
chr9:
15510324-15510115
210
PSIP1_HUMAN
1-24
24
1
A:1-24
24
1.3a
ENST00000380738
3a
ENSE00001132884
chr9:
15506635-15506559
77
PSIP1_HUMAN
25-50
26
1
A:25-50
26
1.5
ENST00000380738
5
ENSE00001132876
chr9:
15490122-15489984
139
PSIP1_HUMAN
50-96
47
1
A:50-93
44
1.7
ENST00000380738
7
ENSE00001089135
chr9:
15486929-15486825
105
PSIP1_HUMAN
97-131
35
0
-
-
1.8b
ENST00000380738
8b
ENSE00001132860
chr9:
15486066-15486004
63
PSIP1_HUMAN
132-152
21
0
-
-
1.9
ENST00000380738
9
ENSE00001132852
chr9:
15479685-15479589
97
PSIP1_HUMAN
153-185
33
0
-
-
1.10
ENST00000380738
10
ENSE00001132844
chr9:
15478550-15478475
76
PSIP1_HUMAN
185-210
26
0
-
-
1.11a
ENST00000380738
11a
ENSE00001132838
chr9:
15474235-15474007
229
PSIP1_HUMAN
210-286
77
0
-
-
1.12a
ENST00000380738
12a
ENSE00001420149
chr9:
15472748-15472630
119
PSIP1_HUMAN
287-326
40
0
-
-
1.14
ENST00000380738
14
ENSE00001132824
chr9:
15469991-15469936
56
PSIP1_HUMAN
326-345
20
0
-
-
1.15
ENST00000380738
15
ENSE00001132819
chr9:
15469334-15469264
71
PSIP1_HUMAN
345-368
24
0
-
-
1.16
ENST00000380738
16
ENSE00001132811
chr9:
15469056-15468955
102
PSIP1_HUMAN
369-402
34
0
-
-
1.17
ENST00000380738
17
ENSE00001132806
chr9:
15468841-15468628
214
PSIP1_HUMAN
403-474
72
0
-
-
1.18
ENST00000380738
18
ENSE00001089131
chr9:
15466857-15466746
112
PSIP1_HUMAN
474-511
38
0
-
-
1.19
ENST00000380738
19
ENSE00001486085
chr9:
15465578-15464064
1515
PSIP1_HUMAN
511-530
20
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2m16a_ (A:)
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Class
:
All beta proteins
(24004)
Fold
:
SH3-like barrel
(1035)
Superfamily
:
Tudor/PWWP/MBT
(72)
Family
:
PWWP domain
(14)
Protein domain
:
automated matches
(7)
Human (Homo sapiens) [TaxId: 9606]
(7)
1a
d2m16a_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (591 KB)
Header - Asym.Unit
Biol.Unit 1 (31 KB)
Header - Biol.Unit 1
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