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2M09
Asym. Unit
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Asym.Unit (329 KB)
Biol.Unit 1 (34 KB)
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Models
(10 )
Title
:
STRUCTURE, PHOSPHORYLATION AND U2AF65 BINDING OF THE NTERMINAL DOMAIN OF SPLICING FACTOR 1 DURING 3 SPLICE SITE RECOGNITION
Authors
:
T. Madl, M. Sattler, Y. Zhang, I. Bagdiul, T. Kern, H. Kang, P. Zou, N. Mae S. A. Sieber, A. Kraemer
Date
:
22 Oct 12 (Deposition) - 30 Jan 13 (Release) - 30 Jan 13 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (10 x)
Biol. Unit 1: A (1x)
Keywords
:
Spliceosome Assembly, Sf1, Uhm, Ulm, Rrm, Transcription
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
Y. Zhang, T. Madl, I. Bagdiul, T. Kern, H. S. Kang, P. Zou, N. Mausbacher S. A. Sieber, A. Kramer, M. Sattler
Structure, Phosphorylation And U2Af65 Binding Of The N-Terminal Domain Of Splicing Factor 1 During 3'-Splice Sit Recognition.
Nucleic Acids Res. V. 41 1343 2013
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(4, 4)
Info
All Exons
Exon 1.3a (A:25-54)
Exon 1.4a (A:54-79)
Exon 1.6d (A:79-130)
Exon 1.7 (A:130-145)
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1: Boundary 1.1e/1.3a
2: Boundary 1.3a/1.4a
3: Boundary 1.4a/1.6d
4: Boundary 1.6d/1.7
5: Boundary 1.7/1.8c
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1e
ENST00000377390
1e
ENSE00001875721
chr11:
64546202-64545834
369
SF01_HUMAN
1-11
11
0
-
-
1.3a
ENST00000377390
3a
ENSE00001681285
chr11:
64544098-64543970
129
SF01_HUMAN
11-54
44
1
A:25-54
30
1.4a
ENST00000377390
4a
ENSE00001605002
chr11:
64540977-64540902
76
SF01_HUMAN
54-79
26
1
A:54-79
26
1.6d
ENST00000377390
6d
ENSE00001732947
chr11:
64537880-64537728
153
SF01_HUMAN
79-130
52
1
A:79-130
52
1.7
ENST00000377390
7
ENSE00001754448
chr11:
64537525-64537436
90
SF01_HUMAN
130-160
31
1
A:130-145
16
1.8c
ENST00000377390
8c
ENSE00001781351
chr11:
64537081-64536898
184
SF01_HUMAN
160-221
62
0
-
-
1.9b
ENST00000377390
9b
ENSE00001785757
chr11:
64536810-64536695
116
SF01_HUMAN
222-260
39
0
-
-
1.10a
ENST00000377390
10a
ENSE00001682227
chr11:
64536601-64536494
108
SF01_HUMAN
260-296
37
0
-
-
1.11b
ENST00000377390
11b
ENSE00001711248
chr11:
64535758-64535578
181
SF01_HUMAN
296-356
61
0
-
-
1.12a
ENST00000377390
12a
ENSE00000863666
chr11:
64535316-64535043
274
SF01_HUMAN
357-448
92
0
-
-
1.13b
ENST00000377390
13b
ENSE00001788125
chr11:
64534723-64534664
60
SF01_HUMAN
448-468
21
0
-
-
1.14a
ENST00000377390
14a
ENSE00001645230
chr11:
64534551-64534372
180
SF01_HUMAN
468-528
61
0
-
-
1.15f
ENST00000377390
15f
ENSE00001473768
chr11:
64533627-64532078
1550
SF01_HUMAN
528-639
112
0
-
-
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (329 KB)
Header - Asym.Unit
Biol.Unit 1 (34 KB)
Header - Biol.Unit 1
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