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Asym. Unit
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Asym.Unit (551 KB)
Biol.Unit 1 (29 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF HARMONIN N TERMINAL DOMAIN IN COMPLEX WITH A EXON68 ENCODED PEPTIDE OF CADHERIN23
Authors
:
L. Pan, L. Wu, C. Zhang, M. Zhang
Date
:
04 May 12 (Deposition) - 15 Aug 12 (Release) - 15 Aug 12 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B (20 x)
Biol. Unit 1: A,B (1x)
Keywords
:
Protein Complex, Usher Syndrome, Structural Protein-Cell Adhesion Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Wu, L. Pan, C. Zhang, M. Zhang
Large Protein Assemblies Formed By Multivalent Interactions Between Cadherin23 And Harmonin Suggest A Stable Anchorage Structure At The Tip Link Of Stereocilia
J. Biol. Chem. 2012
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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Exons
(3, 3)
Info
All Exons
Exon 1.1a (A:1-12)
Exon 1.3b (A:13-35)
Exon 1.4b (A:35-80)
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1: Boundary -/1.1a
2: Boundary 1.1a/1.3b
3: Boundary 1.3b/1.4b
4: Boundary 1.4b/1.5a
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000318024
1a
ENSE00001481272
chr11:
17565963-17565819
145
USH1C_HUMAN
1-12
12
1
A:1-12
12
1.3b
ENST00000318024
3b
ENSE00001356343
chr11:
17554869-17554802
68
USH1C_HUMAN
13-35
23
1
A:13-35
23
1.4b
ENST00000318024
4b
ENSE00000705394
chr11:
17553089-17552946
144
USH1C_HUMAN
35-83
49
1
A:35-80
46
1.5a
ENST00000318024
5a
ENSE00000705392
chr11:
17552839-17552701
139
USH1C_HUMAN
83-129
47
0
-
-
1.6
ENST00000318024
6
ENSE00000705391
chr11:
17548878-17548770
109
USH1C_HUMAN
130-166
37
0
-
-
1.7
ENST00000318024
7
ENSE00000705390
chr11:
17548587-17548563
25
USH1C_HUMAN
166-174
9
0
-
-
1.8
ENST00000318024
8
ENSE00000705389
chr11:
17548357-17548300
58
USH1C_HUMAN
174-193
20
0
-
-
1.9
ENST00000318024
9
ENSE00000705388
chr11:
17547988-17547894
95
USH1C_HUMAN
194-225
32
0
-
-
1.10
ENST00000318024
10
ENSE00000705386
chr11:
17546082-17545998
85
USH1C_HUMAN
225-253
29
0
-
-
1.11
ENST00000318024
11
ENSE00000705385
chr11:
17545025-17544966
60
USH1C_HUMAN
254-273
20
0
-
-
1.12
ENST00000318024
12
ENSE00000705384
chr11:
17544814-17544758
57
USH1C_HUMAN
274-292
19
0
-
-
1.13c
ENST00000318024
13c
ENSE00000705383
chr11:
17544473-17544331
143
USH1C_HUMAN
293-340
48
0
-
-
1.14
ENST00000318024
14
ENSE00000705382
chr11:
17542958-17542893
66
USH1C_HUMAN
340-362
23
0
-
-
1.15a
ENST00000318024
15a
ENSE00000339040
chr11:
17542541-17542417
125
USH1C_HUMAN
362-404
43
0
-
-
1.16
ENST00000318024
16
ENSE00000705380
chr11:
17539021-17538948
74
USH1C_HUMAN
404-428
25
0
-
-
1.25b
ENST00000318024
25b
ENSE00000705348
chr11:
17523527-17523486
42
USH1C_HUMAN
429-442
14
0
-
-
1.26
ENST00000318024
26
ENSE00000705285
chr11:
17523082-17523029
54
USH1C_HUMAN
443-460
18
0
-
-
1.27b
ENST00000318024
27b
ENSE00000705266
chr11:
17522697-17522598
100
USH1C_HUMAN
461-494
34
0
-
-
1.28
ENST00000318024
28
ENSE00000705265
chr11:
17519818-17519709
110
USH1C_HUMAN
494-530
37
0
-
-
1.29b
ENST00000318024
29b
ENSE00001386158
chr11:
17518360-17518305
56
USH1C_HUMAN
531-549
19
0
-
-
1.31h
ENST00000318024
31h
ENSE00002163620
chr11:
17515923-17515442
482
USH1C_HUMAN
549-552
4
0
-
-
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Asym.Unit (551 KB)
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