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2LLP
Asym. Unit
Info
Asym.Unit (364 KB)
Biol.Unit 1 (13 KB)
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Models
(30 )
Title
:
SOLUTION STRUCTURE OF A THP TYPE 1 ALPHA 1 COLLAGEN FRAGMENT (772-786)
Authors
:
I. Bertini, M. Fragai, C. Luchinat, M. Melikian, M. Toccafondi, J. L. La G. B. Fields
Date
:
15 Nov 11 (Deposition) - 30 May 12 (Release) - 30 May 12 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B,C (30 x)
Biol. Unit 1: A,B,C (1x)
Keywords
:
Triple Helical Peptide, Structural Protein, Contractile Protein
(Keyword Search:
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Reference
:
I. Bertini, M. Fragai, C. Luchinat, M. Melikian, M. Toccafondi, J. L. Lauer, G. B. Fields
Structural Basis For Matrix Metalloproteinase 1-Catalyzed Collagenolysis.
J. Am. Chem. Soc. V. 134 2100 2012
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(1, 3)
Info
All Exons
Exon 1.36 (A:13-28 | B:12-27 | C:11-26 (gaps))
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All Exon Boundaries
1: Boundary 1.35/1.36
2: Boundary 1.36/1.37
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000225964
1
ENSE00002177604
chr17:
48278993-48278772
222
CO1A1_HUMAN
1-35
35
0
-
-
1.2b
ENST00000225964
2b
ENSE00000736698
chr17:
48277308-48277114
195
CO1A1_HUMAN
35-100
66
0
-
-
1.3a
ENST00000225964
3a
ENSE00000736703
chr17:
48276951-48276917
35
CO1A1_HUMAN
100-111
12
0
-
-
1.3c
ENST00000225964
3c
ENSE00000819876
chr17:
48276814-48276779
36
CO1A1_HUMAN
112-123
12
0
-
-
1.4c
ENST00000225964
4c
ENSE00000819877
chr17:
48276688-48276587
102
CO1A1_HUMAN
124-157
34
0
-
-
1.5b
ENST00000225964
5b
ENSE00000736713
chr17:
48275865-48275794
72
CO1A1_HUMAN
158-181
24
0
-
-
1.6
ENST00000225964
6
ENSE00001409307
chr17:
48275566-48275522
45
CO1A1_HUMAN
182-196
15
0
-
-
1.7
ENST00000225964
7
ENSE00001415928
chr17:
48275363-48275310
54
CO1A1_HUMAN
197-214
18
0
-
-
1.8
ENST00000225964
8
ENSE00001625237
chr17:
48275146-48275093
54
CO1A1_HUMAN
215-232
18
0
-
-
1.9
ENST00000225964
9
ENSE00001425380
chr17:
48274594-48274541
54
CO1A1_HUMAN
233-250
18
0
-
-
1.10
ENST00000225964
10
ENSE00001423806
chr17:
48274424-48274371
54
CO1A1_HUMAN
251-268
18
0
-
-
1.11
ENST00000225964
11
ENSE00000736739
chr17:
48274031-48273978
54
CO1A1_HUMAN
269-286
18
0
-
-
1.12c
ENST00000225964
12c
ENSE00000736743
chr17:
48273889-48273845
45
CO1A1_HUMAN
287-301
15
0
-
-
1.12d
ENST00000225964
12d
ENSE00000736747
chr17:
48273728-48273675
54
CO1A1_HUMAN
302-319
18
0
-
-
1.13a
ENST00000225964
13a
ENSE00000736751
chr17:
48273560-48273516
45
CO1A1_HUMAN
320-334
15
0
-
-
1.14
ENST00000225964
14
ENSE00001765229
chr17:
48273337-48273284
54
CO1A1_HUMAN
335-352
18
0
-
-
1.15
ENST00000225964
15
ENSE00001241881
chr17:
48273026-48272928
99
CO1A1_HUMAN
353-385
33
0
-
-
1.16
ENST00000225964
16
ENSE00000736762
chr17:
48272839-48272795
45
CO1A1_HUMAN
386-400
15
0
-
-
1.17
ENST00000225964
17
ENSE00000736765
chr17:
48272691-48272593
99
CO1A1_HUMAN
401-433
33
0
-
-
1.18
ENST00000225964
18
ENSE00000736768
chr17:
48272461-48272408
54
CO1A1_HUMAN
434-451
18
0
-
-
1.19
ENST00000225964
19
ENSE00000736772
chr17:
48272189-48272082
108
CO1A1_HUMAN
452-487
36
0
-
-
1.20
ENST00000225964
20
ENSE00000736776
chr17:
48271987-48271934
54
CO1A1_HUMAN
488-505
18
0
-
-
1.21a
ENST00000225964
21a
ENSE00000736779
chr17:
48271808-48271710
99
CO1A1_HUMAN
506-538
33
0
-
-
1.22a
ENST00000225964
22a
ENSE00000736782
chr17:
48271544-48271491
54
CO1A1_HUMAN
539-556
18
0
-
-
1.22d
ENST00000225964
22d
ENSE00000736786
chr17:
48271402-48271304
99
CO1A1_HUMAN
557-589
33
0
-
-
1.23
ENST00000225964
23
ENSE00000736790
chr17:
48270408-48270355
54
CO1A1_HUMAN
590-607
18
0
-
-
1.24
ENST00000225964
24
ENSE00001739834
chr17:
48270211-48270158
54
CO1A1_HUMAN
608-625
18
0
-
-
1.25
ENST00000225964
25
ENSE00000736796
chr17:
48270054-48270001
54
CO1A1_HUMAN
626-643
18
0
-
-
1.26
ENST00000225964
26
ENSE00000736799
chr17:
48269889-48269836
54
CO1A1_HUMAN
644-661
18
0
-
-
1.27b
ENST00000225964
27b
ENSE00000736802
chr17:
48269385-48269341
45
CO1A1_HUMAN
662-676
15
0
-
-
1.28b
ENST00000225964
28b
ENSE00000736805
chr17:
48269247-48269149
99
CO1A1_HUMAN
677-709
33
0
-
-
1.29
ENST00000225964
29
ENSE00000736808
chr17:
48268851-48268744
108
CO1A1_HUMAN
710-745
36
0
-
-
1.30b
ENST00000225964
30b
ENSE00000736811
chr17:
48268285-48268178
108
CO1A1_HUMAN
746-781
36
0
-
-
1.31a
ENST00000225964
31a
ENSE00000736814
chr17:
48267957-48267904
54
CO1A1_HUMAN
782-799
18
0
-
-
1.31c
ENST00000225964
31c
ENSE00000736819
chr17:
48267741-48267688
54
CO1A1_HUMAN
800-817
18
0
-
-
1.32
ENST00000225964
32
ENSE00000736823
chr17:
48267469-48267362
108
CO1A1_HUMAN
818-853
36
0
-
-
1.33
ENST00000225964
33
ENSE00000736827
chr17:
48267273-48267220
54
CO1A1_HUMAN
854-871
18
0
-
-
1.34
ENST00000225964
34
ENSE00000736830
chr17:
48267093-48267040
54
CO1A1_HUMAN
872-889
18
0
-
-
1.35
ENST00000225964
35
ENSE00000736832
chr17:
48266899-48266738
162
CO1A1_HUMAN
890-943
54
0
-
-
1.36
ENST00000225964
36
ENSE00000736834
chr17:
48266636-48266529
108
CO1A1_HUMAN
944-979
36
3
A:13-28
B:12-27
C:11-26 (gaps)
16
16
18
1.37
ENST00000225964
37
ENSE00000736836
chr17:
48266371-48266264
108
CO1A1_HUMAN
980-1015
36
0
-
-
1.38a
ENST00000225964
38a
ENSE00000736838
chr17:
48266156-48266103
54
CO1A1_HUMAN
1016-1033
18
0
-
-
1.39a
ENST00000225964
39a
ENSE00000736840
chr17:
48265998-48265891
108
CO1A1_HUMAN
1034-1069
36
0
-
-
1.39d
ENST00000225964
39d
ENSE00000736842
chr17:
48265510-48265457
54
CO1A1_HUMAN
1070-1087
18
0
-
-
1.39e
ENST00000225964
39e
ENSE00001644681
chr17:
48265344-48265237
108
CO1A1_HUMAN
1088-1123
36
0
-
-
1.40
ENST00000225964
40
ENSE00000736847
chr17:
48264898-48264845
54
CO1A1_HUMAN
1124-1141
18
0
-
-
1.41
ENST00000225964
41
ENSE00001594859
chr17:
48264483-48264376
108
CO1A1_HUMAN
1142-1177
36
0
-
-
1.42a
ENST00000225964
42a
ENSE00000736851
chr17:
48264283-48264001
283
CO1A1_HUMAN
1178-1272
95
0
-
-
1.43a
ENST00000225964
43a
ENSE00000736853
chr17:
48263868-48263678
191
CO1A1_HUMAN
1272-1335
64
0
-
-
1.43c
ENST00000225964
43c
ENSE00000736855
chr17:
48263381-48263139
243
CO1A1_HUMAN
1336-1416
81
0
-
-
1.44
ENST00000225964
44
ENSE00001132088
chr17:
48263009-48260650
2360
CO1A1_HUMAN
1417-1464
48
0
-
-
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Asym.Unit (364 KB)
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