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Getting 'Exon' information from database.
2L9M
Asym. Unit
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Asym.Unit (720 KB)
Biol.Unit 1 (37 KB)
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Models
(20 )
Title
:
STRUCTURE OF CIAP1 CARD
Authors
:
C. L. Day, G. J. P. Rautureau, M. G. Hinds
Date
:
21 Feb 11 (Deposition) - 17 Aug 11 (Release) - 17 Aug 11 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Biol. Unit 1: A (1x)
Keywords
:
Card, Iap, Caspase, Apoptosis Inhibitor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Lopez, S. W. John, T. Tenev, G. J. Rautureau, M. G. Hinds, F. Francalanci, R. Wilson, M. Broemer, M. M. Santoro, C. L. Day, P. Meie
Card-Mediated Autoinhibition Of Ciap1'S E3 Ligase Activity Suppresses Cell Proliferation And Migration.
Mol. Cell V. 42 569 2011
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(4, 4)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_049535 (M453I, chain A, )
2: VAR_025016 (M453V, chain A, )
3: VAR_025017 (A506V, chain A, )
4: VAR_025018 (P549S, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_049535
M
453
I
BIRC2_HUMAN
Polymorphism
34749508
A
M
453
I
2
UniProt
VAR_025016
M
453
V
BIRC2_HUMAN
Polymorphism
---
A
M
453
V
3
UniProt
VAR_025017
A
506
V
BIRC2_HUMAN
Polymorphism
34510872
A
A
506
V
4
UniProt
VAR_025018
P
549
S
BIRC2_HUMAN
Polymorphism
35494784
A
P
549
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: CARD (A:453-543)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CARD
PS50209
CARD caspase recruitment domain profile.
BIRC2_HUMAN
453-543
1
A:453-543
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Exons
(4, 4)
Info
All Exons
Exon 1.7 (A:431-456)
Exon 1.8c (A:456-541)
Exon 1.9 (A:541-555)
Exon 1.10d (A:555-562)
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All Exon Boundaries
1: Boundary 1.6b/1.7
2: Boundary 1.7/1.8c
3: Boundary 1.8c/1.9
4: Boundary 1.9/1.10d
5: Boundary 1.10d/-
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1e
ENST00000227758
1e
ENSE00001373030
chr11:
102217966-102218107
142
BIRC2_HUMAN
-
0
0
-
-
1.3d
ENST00000227758
3d
ENSE00002190786
chr11:
102219329-102221480
2152
BIRC2_HUMAN
1-299
299
0
-
-
1.4
ENST00000227758
4
ENSE00001789805
chr11:
102221575-102221674
100
BIRC2_HUMAN
299-332
34
0
-
-
1.5b
ENST00000227758
5b
ENSE00000930289
chr11:
102233627-102233705
79
BIRC2_HUMAN
332-358
27
0
-
-
1.6b
ENST00000227758
6b
ENSE00000930290
chr11:
102234399-102234447
49
BIRC2_HUMAN
359-375
17
0
-
-
1.7
ENST00000227758
7
ENSE00000930291
chr11:
102239037-102239279
243
BIRC2_HUMAN
375-456
82
1
A:431-456
26
1.8c
ENST00000227758
8c
ENSE00000930292
chr11:
102248227-102248481
255
BIRC2_HUMAN
456-541
86
1
A:456-541
86
1.9
ENST00000227758
9
ENSE00001656578
chr11:
102248588-102248629
42
BIRC2_HUMAN
541-555
15
1
A:541-555
15
1.10d
ENST00000227758
10d
ENSE00002160883
chr11:
102248721-102249401
681
BIRC2_HUMAN
555-618
64
1
A:555-562
8
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (720 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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