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2L87
Asym. Unit
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Asym.Unit (42 KB)
Biol.Unit 1 (6 KB)
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Models
(10 )
Title
:
THE 27-RESIDUE N-TERMINUS CCR5-PEPTIDE IN A TERNARY COMPLEX WITH HIV-1 GP120 AND A CD4-MIMIC PEPTIDE
Authors
:
E. Schnur, E. Noah, I. Ayzenshtat, H. Sargsyan, T. Inui, F. X. Ding, B. Ar Y. Sagi, N. Kessler, R. Levy, T. Scherf, F. Naider, J. Anglister
Date
:
06 Jan 11 (Deposition) - 27 Jul 11 (Release) - 27 Jul 11 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (10 x)
Biol. Unit 1: A (1x)
Keywords
:
Helix, Hiv Co-Receptor, Signaling Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
E. Schnur, E. Noah, I. Ayzenshtat, H. Sargsyan, T. Inui, F. X. Ding, B. Arshava, Y. Sagi, N. Kessler, R. Levy, T. Scherf, F. Naider, J. Anglister
The Conformation And Orientation Of A 27-Residue Ccr5 Peptide In A Ternary Complex With Hiv-1 Gp120 And A Cd4-Mimic Peptide.
J. Mol. Biol. V. 410 778 2011
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Hetero Components
(1, 2)
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All Hetero Components
1a: O-SULFO-L-TYROSINE (TYSa)
1b: O-SULFO-L-TYROSINE (TYSb)
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No.
Name
Count
Type
Full Name
1
TYS
2
Mod. Amino Acid
O-SULFO-L-TYROSINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(3, 3)
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(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_003481 (Y10D, chain A, )
2: VAR_024066 (I12L, chain A, )
3: VAR_024067 (A20S, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_003481
Y
10
D
CCR5_HUMAN
Unclassified
---
A
Y
10
D
2
UniProt
VAR_024066
I
12
L
CCR5_HUMAN
Polymorphism
---
A
I
12
L
3
UniProt
VAR_024067
C
20
S
CCR5_HUMAN
Polymorphism
---
A
A
20
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(1, 1)
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Exon 1.3c (A:7-23)
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1: Boundary 1.2b/1.3c
2: Boundary 1.3c/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2b
ENST00000292303
2b
ENSE00001078626
chr3:
46412345-46412479
135
CCR5_HUMAN
-
0
0
-
-
1.3c
ENST00000292303
3c
ENSE00001054508
chr3:
46414383-46417697
3315
CCR5_HUMAN
1-356
356
1
A:7-23
17
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SCOP Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (42 KB)
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Header - Biol.Unit 1
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