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2L14
Asym. Unit
Info
Asym.Unit (570 KB)
Biol.Unit 1 (30 KB)
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Models
(20 )
Title
:
STRUCTURE OF CBP NUCLEAR COACTIVATOR BINDING DOMAIN IN COMPLEX WITH P53 TAD
Authors
:
C. Lee, M. A. Martinez-Yamout, H. J. Dyson, P. E. Wright
Date
:
22 Jul 10 (Deposition) - 03 Nov 10 (Release) - 19 Jan 11 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B (20 x)
Biol. Unit 1: A,B (1x)
Keywords
:
P53, Cbp, P300, Tad, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. W. Lee, M. A. Martinez-Yamout, H. J. Dyson, P. E. Wright
Structure Of The P53 Transactivation Domain In Complex With The Nuclear Receptor Coactivator Binding Domain Of Creb Binding Protein.
Biochemistry V. 49 9964 2010
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
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SAPs(SNPs)/Variants
(45, 45)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
01: VAR_044549 (S15R, chain B, )
02: VAR_044550 (Q16L, chain B, )
03: VAR_044551 (E17D, chain B, )
04: VAR_044552 (K24N, chain B, )
05: VAR_044553 (E28A, chain B, )
06: VAR_044554 (V31I, chain B, )
07: VAR_044555 (S33T, chain B, )
08: VAR_044556 (P34L, chain B, )
09: VAR_005852 (L35F, chain B, )
10: VAR_044557 (P36L, chain B, )
11: VAR_044558 (S37P, chain B, )
12: VAR_044559 (S37T, chain B, )
13: VAR_044560 (A39P, chain B, )
14: VAR_044561 (A39V, chain B, )
15: VAR_044562 (D42Y, chain B, )
16: VAR_005853 (L43S, chain B, )
17: VAR_044563 (M44I, chain B, )
18: VAR_044564 (M44T, chain B, )
19: VAR_044565 (M44V, chain B, )
20: VAR_044566 (L45M, chain B, )
21: VAR_044567 (S46F, chain B, )
22: VAR_044568 (S46P, chain B, )
23: VAR_044569 (P47L, chain B, )
24: VAR_014632 (P47S, chain B, )
25: VAR_044570 (D48G, chain B, )
26: VAR_044571 (D49H, chain B, )
27: VAR_044572 (D49N, chain B, )
28: VAR_044573 (D49Y, chain B, )
29: VAR_044574 (Q52H, chain B, )
30: VAR_005854 (W53C, chain B, )
31: VAR_044575 (W53G, chain B, )
32: VAR_044576 (F54L, chain B, )
33: VAR_044577 (F54Y, chain B, )
34: VAR_044578 (E56K, chain B, )
35: VAR_044579 (E56V, chain B, )
36: VAR_044580 (P58Q, chain B, )
37: VAR_044581 (P58T, chain B, )
38: VAR_044582 (G59C, chain B, )
39: VAR_044583 (G59D, chain B, )
40: VAR_045783 (G59N, chain B, )
41: VAR_044584 (P60L, chain B, )
42: VAR_044585 (P60Q, chain B, )
43: VAR_005855 (P60S, chain B, )
44: VAR_044586 (D61G, chain B, )
45: VAR_044587 (D61N, chain B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_044549
S
15
R
P53_HUMAN
Unclassified
---
B
S
15
R
02
UniProt
VAR_044550
Q
16
L
P53_HUMAN
Unclassified
---
B
Q
16
L
03
UniProt
VAR_044551
E
17
D
P53_HUMAN
Unclassified
---
B
E
17
D
04
UniProt
VAR_044552
K
24
N
P53_HUMAN
Unclassified
---
B
K
24
N
05
UniProt
VAR_044553
E
28
A
P53_HUMAN
Unclassified
---
B
E
28
A
06
UniProt
VAR_044554
V
31
I
P53_HUMAN
Unclassified
---
B
V
31
I
07
UniProt
VAR_044555
S
33
T
P53_HUMAN
Unclassified
---
B
S
33
T
08
UniProt
VAR_044556
P
34
L
P53_HUMAN
Unclassified
---
B
P
34
L
09
UniProt
VAR_005852
L
35
F
P53_HUMAN
Unclassified
---
B
L
35
F
10
UniProt
VAR_044557
P
36
L
P53_HUMAN
Unclassified
---
B
P
36
L
11
UniProt
VAR_044558
S
37
P
P53_HUMAN
Unclassified
---
B
S
37
P
12
UniProt
VAR_044559
S
37
T
P53_HUMAN
Unclassified
---
B
S
37
T
13
UniProt
VAR_044560
A
39
P
P53_HUMAN
Unclassified
---
B
A
39
P
14
UniProt
VAR_044561
A
39
V
P53_HUMAN
Unclassified
---
B
A
39
V
15
UniProt
VAR_044562
D
42
Y
P53_HUMAN
Unclassified
---
B
D
42
Y
16
UniProt
VAR_005853
L
43
S
P53_HUMAN
Unclassified
---
B
L
43
S
17
UniProt
VAR_044563
M
44
I
P53_HUMAN
Unclassified
---
B
M
44
I
18
UniProt
VAR_044564
M
44
T
P53_HUMAN
Unclassified
---
B
M
44
T
19
UniProt
VAR_044565
M
44
V
P53_HUMAN
Unclassified
---
B
M
44
V
20
UniProt
VAR_044566
L
45
M
P53_HUMAN
Unclassified
---
B
L
45
M
21
UniProt
VAR_044567
S
46
F
P53_HUMAN
Unclassified
---
B
S
46
F
22
UniProt
VAR_044568
S
46
P
P53_HUMAN
Unclassified
---
B
S
46
P
23
UniProt
VAR_044569
P
47
L
P53_HUMAN
Unclassified
---
B
P
47
L
24
UniProt
VAR_014632
P
47
S
P53_HUMAN
Polymorphism
1800371
B
P
47
S
25
UniProt
VAR_044570
D
48
G
P53_HUMAN
Unclassified
---
B
D
48
G
26
UniProt
VAR_044571
D
49
H
P53_HUMAN
Unclassified
---
B
D
49
H
27
UniProt
VAR_044572
D
49
N
P53_HUMAN
Unclassified
---
B
D
49
N
28
UniProt
VAR_044573
D
49
Y
P53_HUMAN
Unclassified
---
B
D
49
Y
29
UniProt
VAR_044574
Q
52
H
P53_HUMAN
Unclassified
---
B
Q
52
H
30
UniProt
VAR_005854
W
53
C
P53_HUMAN
Unclassified
---
B
W
53
C
31
UniProt
VAR_044575
W
53
G
P53_HUMAN
Unclassified
---
B
W
53
G
32
UniProt
VAR_044576
F
54
L
P53_HUMAN
Unclassified
---
B
F
54
L
33
UniProt
VAR_044577
F
54
Y
P53_HUMAN
Unclassified
---
B
F
54
Y
34
UniProt
VAR_044578
E
56
K
P53_HUMAN
Unclassified
---
B
E
56
K
35
UniProt
VAR_044579
E
56
V
P53_HUMAN
Unclassified
---
B
E
56
V
36
UniProt
VAR_044580
P
58
Q
P53_HUMAN
Unclassified
---
B
P
58
Q
37
UniProt
VAR_044581
P
58
T
P53_HUMAN
Unclassified
---
B
P
58
T
38
UniProt
VAR_044582
G
59
C
P53_HUMAN
Unclassified
---
B
G
59
C
39
UniProt
VAR_044583
G
59
D
P53_HUMAN
Unclassified
---
B
G
59
D
40
UniProt
VAR_045783
G
59
N
P53_HUMAN
Unclassified
---
B
G
59
N
41
UniProt
VAR_044584
P
60
L
P53_HUMAN
Unclassified
---
B
P
60
L
42
UniProt
VAR_044585
P
60
Q
P53_HUMAN
Unclassified
---
B
P
60
Q
43
UniProt
VAR_005855
P
60
S
P53_HUMAN
Unclassified
---
B
P
60
S
44
UniProt
VAR_044586
D
61
G
P53_HUMAN
Unclassified
---
B
D
61
G
45
UniProt
VAR_044587
D
61
N
P53_HUMAN
Unclassified
---
B
D
61
N
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
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Exons
(3, 3)
Info
All Exons
Exon 1.3a (B:13-25)
Exon 1.3d (B:25-32)
Exon 1.4b (B:33-61)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.1a/1.3a
2: Boundary 1.3a/1.3d
3: Boundary 1.3d/1.4b
4: Boundary 1.4b/1.5d
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000269305
1a
ENSE00001146308
chr17:
7590856-7590695
162
P53_HUMAN
-
0
0
-
-
1.3a
ENST00000269305
3a
ENSE00002194362
chr17:
7579940-7579839
102
P53_HUMAN
1-25
25
1
B:13-25
13
1.3d
ENST00000269305
3d
ENSE00001710434
chr17:
7579721-7579700
22
P53_HUMAN
25-32
8
1
B:25-32
8
1.4b
ENST00000269305
4b
ENSE00001718735
chr17:
7579590-7579312
279
P53_HUMAN
33-125
93
1
B:33-61
29
1.5d
ENST00000269305
5d
ENSE00001255919
chr17:
7578554-7578371
184
P53_HUMAN
126-187
62
0
-
-
1.6a
ENST00000269305
6a
ENSE00001255912
chr17:
7578289-7578177
113
P53_HUMAN
187-224
38
0
-
-
1.7b
ENST00000269305
7b
ENSE00001665758
chr17:
7577608-7577499
110
P53_HUMAN
225-261
37
0
-
-
1.8
ENST00000269305
8
ENSE00001789298
chr17:
7577155-7577019
137
P53_HUMAN
261-307
47
0
-
-
1.9
ENST00000269305
9
ENSE00002149110
chr17:
7576926-7576853
74
P53_HUMAN
307-331
25
0
-
-
1.11
ENST00000269305
11
ENSE00001728015
chr17:
7574033-7573927
107
P53_HUMAN
332-367
36
0
-
-
1.12d
ENST00000269305
12d
ENSE00001757276
chr17:
7573008-7571720
1289
P53_HUMAN
367-393
27
0
-
-
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2l14a_ (A:)
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(
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Protein Domains
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(
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Organisms
(
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(
)
Class
:
All alpha proteins
(14657)
Fold
:
Nuclear receptor coactivator interlocking domain
(8)
Superfamily
:
Nuclear receptor coactivator interlocking domain
(8)
Family
:
Nuclear receptor coactivator interlocking domain
(8)
Protein domain
:
automated matches
(4)
Mouse (Mus musculus) [TaxId: 10090]
(3)
1a
d2l14a_
A:
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_Creb_binding_2l14A01 (A:2059-2116)
2a: PFAM_P53_TAD_2l14B01 (B:13-29)
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Clans
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)
Clan
:
no clan defined [family: Creb_binding]
(4)
Family
:
Creb_binding
(4)
Mus musculus (Mouse)
(3)
1a
Creb_binding-2l14A01
A:2059-2116
Clan
:
no clan defined [family: P53_TAD]
(6)
Family
:
P53_TAD
(6)
Homo sapiens (Human)
(6)
2a
P53_TAD-2l14B01
B:13-29
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